ID Crosswalk

Original TK1151 gene IDs are linked to OH-1004 gene-level counterparts. TK1151 and OH-1004 are different Taraxacum kok-saghyz materials, not two releases of the same cultivar. Complete crosswalk coverage does not mean every relationship is one-to-one; complex mappings require review of their category and evidence.

Version Sources

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Version	Assembly / Annotation Accession	Source Database	Publication	DOI / PMID	Download Date
TK1151 Taraxacum kok-saghyz	GWHBCHF00000000 GWHBCHF00000000 GFF/RNA/CDS/Protein	NGDC Genome Warehouse (GWH)	Extensive sequence divergence between the reference genomes of Taraxacum kok-saghyz and Taraxacum mongolicum Tao Lin, Xia Xu, Huilong Du, Xiuli Fan, Qingwen Chen, et al.; Science China Life Sciences; 2022	10.1007/s11427-021-2033-2 PMID: 34939160	2026-08-14
OH-1004 / OSU_TarKok_2.0 Taraxacum kok-saghyz	GCA_047496595.1 GCA_047496595.1_OSU_TarKok_2.0 GenBank GFF	NCBI Assembly / NGDC integrated NCBI Assembly	no linked publication found in NCBI/NGDC assembly records as of 2026-08-17 not available	not available	2026-08-14

Complete Gene ID Crosswalk

TK1151 reference: 45224 genes; 14 rows in the current filter. Showing page 1 / 1.

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Examples TkA01G624900 LXL04_000258

All Strict 1:1: 6347 Probable 1:1: 1703 One-to-many: 826 Many-to-one: 24458 Unmapped: 2782 Annotation conflict: 9108

Strict 1:1 requires RBH, high identity, query/target coverage, CDS support, and JCVI synteny. Probable 1:1 still requires RBH and coverage thresholds. Low-coverage, multi-hit, split/merged annotation, and unplaced-sequence cases are excluded from 1:1 conversion. Protein and CDS coverage each use the actual sequence span of the best-scoring single HSP divided by the corresponding representative sequence length; query is TK1151 and target is OH-1004. Protein, CDS, and transcript isoforms are not shown here.

TK1151 Gene ID	OH-1004 Gene ID	Category	Relationship / confidence	Identity / coverage	Synteny block	Description
TkA01G200310 Chr01:51045492-51046639 (+) GWHBCHF00000002	LXL04_031346 Chr07:4833111-4841893 (+) CM104805.1	Many-to-one	non reciprocal best hit Complex	90.300 Q 52.593 / T 3.380		TkA01G200310
TkA02G058770 Chr02:15332864-15335724 (-) GWHBCHF00000003	LXL04_031346 Chr07:4833111-4841893 (+) CM104805.1	Many-to-one	non reciprocal best hit Complex	48.800 Q 51.600 / T 15.587		TkA02G058770
TkA02G059370 Chr02:15489966-15492826 (-) GWHBCHF00000003	LXL04_031346 Chr07:4833111-4841893 (+) CM104805.1	Many-to-one	non reciprocal best hit Complex	48.800 Q 51.600 / T 15.587		TkA02G059370
TkA02G093180 Chr02:24311529-24313643 (-) GWHBCHF00000003	LXL04_031346 Chr07:4833111-4841893 (+) CM104805.1	Many-to-one	non reciprocal best hit Complex	29.800 Q 85.379 / T 26.948		TkA02G093180
TkA02G406420 Chr02:103334945-103341531 (-) GWHBCHF00000003	LXL04_031346 Chr07:4833111-4841893 (+) CM104805.1	Many-to-one	non reciprocal best hit Complex	85.700 Q 54.960 / T 27.887		TkA02G406420
TkA03G527760 Chr03:132610009-132619812 (-) GWHBCHF00000004	LXL04_031346 Chr07:4833111-4841893 (+) CM104805.1	Many-to-one	non reciprocal best hit Complex	34.700 Q 81.983 / T 32.254		TkA03G527760
TkA06G443680 Chr06:109630095-109630574 (+) GWHBCHF00000007	LXL04_031346 Chr07:4833111-4841893 (+) CM104805.1	Many-to-one	non reciprocal best hit Complex	58.200 Q 34.591 / T 2.582		TkA06G443680
TkA07G021010 Chr07:5695724-5700182 (-) GWHBCHF00000008	LXL04_031346 Chr07:4833111-4841893 (+) CM104805.1	Annotation conflict	RBH but below probable coverage or synteny threshold Review	88.600 Q 99.078 / T 48.357		TkA07G021010
TkA08G102440 Chr08:26555527-26558080 (+) GWHBCHF00000009	LXL04_031346 Chr07:4833111-4841893 (+) CM104805.1	Many-to-one	non reciprocal best hit Complex	89.100 Q 94.483 / T 34.930	JCVI_TKOH_00346	TkA08G102440
TkA08G191750 Chr08:50112304-50116420 (+) GWHBCHF00000009	LXL04_031346 Chr07:4833111-4841893 (+) CM104805.1	Many-to-one	non reciprocal best hit Complex	77.000 Q 97.660 / T 51.455		TkA08G191750
TkA08G219140 Chr08:57264921-57266267 (-) GWHBCHF00000009	LXL04_031346 Chr07:4833111-4841893 (+) CM104805.1	Many-to-one	non reciprocal best hit Complex	56.300 Q 32.342 / T 4.085		TkA08G219140
TkA08G237410 Chr08:61849008-61850303 (+) GWHBCHF00000009	LXL04_031346 Chr07:4833111-4841893 (+) CM104805.1	Many-to-one	non reciprocal best hit Complex	55.000 Q 64.948 / T 10.376		TkA08G237410
TkA08G237420 Chr08:61850476-61850805 (+) GWHBCHF00000009	LXL04_031346 Chr07:4833111-4841893 (+) CM104805.1	Many-to-one	non reciprocal best hit Complex	53.600 Q 77.064 / T 3.944		TkA08G237420
TkAUNG057140 ChrUn:16297335-16302331 (-) GWHBCHF00000001	LXL04_031346 Chr07:4833111-4841893 (+) CM104805.1	Many-to-one	non reciprocal best hit Complex	34.800 Q 63.386 / T 15.399		TkAUNG057140

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