Gene Card
Gene overview
cDNA / CDS / Protein Sequences
552 bp · LXL04_038031|LXL04_038031|OH1004|cDNA
ATGTCGTCTTCATGTGCTACGTTACCGCATCGATTAAGAACTGAGTGGCCTACCGCTAACAAGTTCAGTTCCATCGTCAAAGCTCAACCTTATAGAAATAGATGTGGTTTGAGTAGGAGAGATTTTGCTACGAAAGGAATTGTTGCAGCTGGTGCTTTGGTGATGCCGTCTACTTTGCTATCTCAATCTGCTCAATGCTTAGAGAGACTGCCTTTCAAAAAAGATGGATATAACTTTTGGACATGGAGAGGTCACAAAAT...
552 bp · LXL04_038031|LXL04_038031|OH1004|CDS
ATGTCGTCTTCATGTGCTACGTTACCGCATCGATTAAGAACTGAGTGGCCTACCGCTAACAAGTTCAGTTCCATCGTCAAAGCTCAACCTTATAGAAATAGATGTGGTTTGAGTAGGAGAGATTTTGCTACGAAAGGAATTGTTGCAGCTGGTGCTTTGGTGATGCCGTCTACTTTGCTATCTCAATCTGCTCAATGCTTAGAGAGACTGCCTTTCAAAAAAGATGGATATAACTTTTGGACATGGAGAGGTCACAAAAT...
Protein
Download Protein FASTA183 aa · LXL04_038031|LXL04_038031|OH1004|PROTEIN
MSSSCATLPHRLRTEWPTANKFSSIVKAQPYRNRCGLSRRDFATKGIVAAGALVMPSTLLSQSAQCLERLPFKKDGYNFWTWRGHKIHYVEEGEGFLIVLIHGFGASAFHWRYNTPELAKKYKVYAVDLLGFGWSEKALVDYDALVWRDQVADFLKEIVKEPTILVGNRRTKKCKKWKDAFID
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_038031 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_038031 |
|---|---|
| Location | Chr09:29353474-29354522 (-) |
| Description | Similar to dmpD: 2-hydroxymuconate semialdehyde hydrolase (Pseudomonas sp. (strain CF600) |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0009636 response to toxic substance Biological Process GO:0010628 positive regulation of gene expression Biological Process GO:0016311 dephosphorylation Biological Process GO:0042632 cholesterol homeostasis Biological Process GO:0043640 benzoate catabolic process via hydroxylation Biological Process GO:0043651 linoleic acid metabolic process Biological Process GO:0045777 positive regulation of blood pressure Biological Process GO:0046272 stilbene catabolic process Biological Process GO:0046464 acylglycerol catabolic process Biological Process GO:0046839 phospholipid dephosphorylation Biological Process GO:0090181 regulation of cholesterol metabolic process Biological Process GO:0097176 epoxide metabolic process Biological Process |
| KEGG gene cross-reference | ag:CAA36993 mbo:BQ2027_MB2734 pau:PA14_26090 rno:65030 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF12697.14Abhydrolase_698-168 aaPF00561.27Abhydrolase_198-167 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_038031 | PF12697.14 | Abhydrolase_6 | 98 | 168 | 2.1e-11 | 45.6 |
| LXL04_038031 | PF00561.27 | Abhydrolase_1 | 98 | 167 | 4e-09 | 37.2 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.