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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

LXL04_023841
Reference: OH-1004 Chr: Chr05 Coordinates: 70500113-70501801 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

663 bp · LXL04_023841|LXL04_023841|OH1004|cDNA

ATGCCTCTTACTCCTGATTTCGATTTTCTGATCAGTACACAAACATCTCCTCCTCTCCCGATTTCGATTTTCTGGTATGGAGTAATAGGCGACGGCGATATCTTCACATCATTCACTGATTTTACGGACCGGATTTTTAGAGAGGATTGTAAAACTGTGGACGTTAAAGGTTCTCATTCAGAGCACTTGGGAGATGAGATTCTCAACTTGAGGAATACATTGTTGCAGAGTGAACTGGAGAGGGAGAGAATAGCATTGGA...

663 bp · LXL04_023841|LXL04_023841|OH1004|CDS

ATGCCTCTTACTCCTGATTTCGATTTTCTGATCAGTACACAAACATCTCCTCCTCTCCCGATTTCGATTTTCTGGTATGGAGTAATAGGCGACGGCGATATCTTCACATCATTCACTGATTTTACGGACCGGATTTTTAGAGAGGATTGTAAAACTGTGGACGTTAAAGGTTCTCATTCAGAGCACTTGGGAGATGAGATTCTCAACTTGAGGAATACATTGTTGCAGAGTGAACTGGAGAGGGAGAGAATAGCATTGGA...

220 aa · LXL04_023841|LXL04_023841|OH1004|PROTEIN

MPLTPDFDFLISTQTSPPLPISIFWYGVIGDGDIFTSFTDFTDRIFREDCKTVDVKGSHSEHLGDEILNLRNTLLQSELERERIALELEEEKKAQAERDKMLQESGELTEVKAEYEKLLMEFEAERTMNKIQIDNLTRRLADATSCLDEEPRVSYTSNSDISLTELEASIQVLEKALSLQNLESVVELETEKDKEASNKYEKLYMELMAAKEEACLEMLL

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDLXL04_023841
Source versionOH-1004 / GCA_047496595.1_OSU_TarKok_2.0
SNP / Indel variants and carrier samplesCRA009020 · OH-1004

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDLXL04_023841
LocationChr05:70500113-70501801 (-)
DescriptionSimilar to KIN7O: Kinesin-like protein KIN-7O
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
UniProt: F4J2K4 Kinesin-like protein KIN-7O. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os09g0421200 Kinesin-like protein KIN-7I. No verified direct reference in this release
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_023841 · GCA_047496595.1_OSU_TarKok_2.0.

GO annotations (OH1004 source)
GO:0000226 microtubule cytoskeleton organization Biological Process
GO:0000278 mitotic cell cycle Biological Process
GO:0007018 microtubule-based movement Biological Process
GO:0008608 attachment of spindle microtubules to kinetochore Biological Process
GO:0033044 regulation of chromosome organization Biological Process
GO:0042327 positive regulation of phosphorylation Biological Process
GO:0140694 membraneless organelle assembly Biological Process
GO:1901987 regulation of cell cycle phase transition Biological Process
GO:0000776 kinetochore Cellular Component
GO:0000779 condensed chromosome, centromeric region Cellular Component
GO:0005635 nuclear envelope Cellular Component
GO:0005694 chromosome Cellular Component
KEGG gene cross-reference
ath:AT3G10180
dosa:Os09g0421200
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.564
Rank 1 · LXL04_023841 · OH-1004
Nucleus0.332
Rank 2 · LXL04_023841 · OH-1004
Cell membrane0.121
Rank 3 · LXL04_023841 · OH-1004
Golgi apparatus0.087
Rank 4 · LXL04_023841 · OH-1004
Endoplasmic reticulum0.058
Rank 5 · LXL04_023841 · OH-1004

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
F4J2K4Arabidopsis thalianaKinesin-like protein KIN-7O75.000%Swiss-Protweak database homology
B9G3M6Oryza sativa subsp. japonicaKinesin-like protein KIN-7I66.071%Swiss-Protweak database homology

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