Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1404 bp · LXL04_021744|LXL04_021744|OH1004|cDNA
ATGCCTAGAAGACACAATCGGGGTTGTTCAAGCTCAATGAGGTTACTACAAAAGGATTTTGTGGAAATGATGATGAAAATTGGGCTAGAGAATAATATGCTTAAGGAAAGTGCACATAAGGCTGCTGAGTTTAATGTTCAAGCTGCACAACAAGGGATGGTTTACATAGATGAAGTCGATAAGATCACCAaaaagGCTGAGAGCATGAATGTTAGCAGAGATGTTTCAGGTGAAGGTGTTCAGCAAGCCTTACTCAAAAT...
1404 bp · LXL04_021744|LXL04_021744|OH1004|CDS
ATGCCTAGAAGACACAATCGGGGTTGTTCAAGCTCAATGAGGTTACTACAAAAGGATTTTGTGGAAATGATGATGAAAATTGGGCTAGAGAATAATATGCTTAAGGAAAGTGCACATAAGGCTGCTGAGTTTAATGTTCAAGCTGCACAACAAGGGATGGTTTACATAGATGAAGTCGATAAGATCACCAAAAAGGCTGAGAGCATGAATGTTAGCAGAGATGTTTCAGGTGAAGGTGTTCAGCAAGCCTTACTCAAAAT...
Protein
Download Protein FASTA467 aa · LXL04_021744|LXL04_021744|OH1004|PROTEIN
MPRRHNRGCSSSMRLLQKDFVEMMMKIGLENNMLKESAHKAAEFNVQAAQQGMVYIDEVDKITKKAESMNVSRDVSGEGVQQALLKMLEGTIVNVPEKGARKHPRGENVQLLTITKKGYVIPIQTRSSPSSSVVQKEREEKLIQTLKDRLTPYVQGNKDEFVRNAEAEVLKLSNAESRSFENSYIPENPRTPKPLTFSKNRLRGAKNRSNISPVAKKFFRKNDFFFSKNFAYVQTFFLCICAQFFVLFQNRSKTRNFFKF...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_021744 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_021744 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr04:136185352-136191623 (-) | |||||||||
| Description | Similar to CLPX1: CLP protease regulatory subunit CLPX1, mitochondrial | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0051301 cell division Biological Process GO:0051603 proteolysis involved in protein catabolic process Biological Process GO:0005739 mitochondrion Cellular Component GO:0005759 mitochondrial matrix Cellular Component GO:0009376 HslUV protease complex Cellular Component GO:0009507 chloroplast Cellular Component GO:0005524 ATP binding Molecular Function GO:0008233 peptidase activity Molecular Function GO:0008270 zinc ion binding Molecular Function GO:0016887 ATP hydrolysis activity Molecular Function GO:0046983 protein dimerization activity Molecular Function GO:0051082 unfolded protein binding Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT1G33360 ath:AT5G53350 lre:Lreu_0653 nse:NSE_0753 ppe:PEPE_1141 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF07724.21AAA_221-124 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_021744 | PF07724.21 | AAA_2 | 21 | 124 | 6e-09 | 36.9 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.