Gene Card
Gene overview
cDNA / CDS / Protein Sequences
10791 bp · LXL04_005571|LXL04_005571|OH1004|cDNA
ATGGCTGAAATCGTAGTTAGCGCCGTCATCACTGTGCTGTGTGAAAAGCTGATCTCTGGTGACTTGTTGAAGCTGGCTCGATCCAAAGGTGTCAATTCTCAGGTGCAGAAATTGAAGGATGACTTGCCCTTGATCCAAGCCGTTCTTGCTGATGCAACCCAGAAGCACATAACAAACGAAGCTGTTCAACTGTGGGTGAACCAGCTCCAAGAATTGGCTTACGACATAGATGATGCACTCGATGATTTGGCTACCGAAGC...
10791 bp · LXL04_005571|LXL04_005571|OH1004|CDS
ATGGCTGAAATCGTAGTTAGCGCCGTCATCACTGTGCTGTGTGAAAAGCTGATCTCTGGTGACTTGTTGAAGCTGGCTCGATCCAAAGGTGTCAATTCTCAGGTGCAGAAATTGAAGGATGACTTGCCCTTGATCCAAGCCGTTCTTGCTGATGCAACCCAGAAGCACATAACAAACGAAGCTGTTCAACTGTGGGTGAACCAGCTCCAAGAATTGGCTTACGACATAGATGATGCACTCGATGATTTGGCTACCGAAGC...
Protein
Download Protein FASTA3596 aa · LXL04_005571|LXL04_005571|OH1004|PROTEIN
MAEIVVSAVITVLCEKLISGDLLKLARSKGVNSQVQKLKDDLPLIQAVLADATQKHITNEAVQLWVNQLQELAYDIDDALDDLATEAIRRKLKQEARASTGNITGKVLKFFPNCCTNLTPHNITYGRQMRSKLDEVSTKLSDLVYQRNGLGLNVNVGRSNITERRQEETSLVDESKIMGREGDKEALLEKLLGNEECVENVSIVSIVGMGGIGKTTLAKLLYNDRKVKDHFEVKAWVCVSEDFDVFNISKAIFQEVIGEH...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | LXL04_005571 |
|---|---|
| Source version | OH-1004 / GCA_047496595.1_OSU_TarKok_2.0 |
SNP / Indel variants and carrier samplesCRA009020 · OH-1004
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | LXL04_005571 | |||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr01:168548019-168568350 (+) | |||||||||||||||||||||
| Description | Similar to KIN14J: Kinesin-like protein KIN-14J | |||||||||||||||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
Rice
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| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||||||||||||||
| GO annotations (OH1004 source) | GO:0007017 microtubule-based process Biological Process GO:0007018 microtubule-based movement Biological Process GO:0005634 nucleus Cellular Component GO:0005874 microtubule Cellular Component GO:0015630 microtubule cytoskeleton Cellular Component GO:0003777 microtubule motor activity Molecular Function GO:0005524 ATP binding Molecular Function GO:0008017 microtubule binding Molecular Function | |||||||||||||||||||||
| KEGG gene cross-reference | ath:AT1G63640 ath:AT5G41310 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF18052.7Rx_N5-94 aaPF00931.29NB-ARC181-351 aaPF23559.2WHD_DRP438-507 aaPF23598.2LRR_14580-862 aaPF25019.1LRR_R13L1-DRL21705-831 aaPF23247.2LRR_RPS2923-1023 aaPF16796.12Microtub_bd1446-1607 aaPF00225.30Kinesin1467-1609 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| LXL04_005571 | PF18052.7 | Rx_N | 5 | 94 | 1.3e-39 | 134.9 |
| LXL04_005571 | PF00931.29 | NB-ARC | 181 | 351 | 4.9e-76 | 254.9 |
| LXL04_005571 | PF23559.2 | WHD_DRP | 438 | 507 | 4.7e-47 | 158.6 |
| LXL04_005571 | PF23598.2 | LRR_14 | 580 | 862 | 2e-54 | 185.4 |
| LXL04_005571 | PF25019.1 | LRR_R13L1-DRL21 | 705 | 831 | 4.7e-76 | 253.5 |
| LXL04_005571 | PF23247.2 | LRR_RPS2 | 923 | 1023 | 4.5e-26 | 92.4 |
| LXL04_005571 | PF16796.12 | Microtub_bd | 1446 | 1607 | 2.8e-47 | 161.2 |
| LXL04_005571 | PF00225.30 | Kinesin | 1467 | 1609 | 2.6e-136 | 454.6 |
| LXL04_005571 | PF00225.30 | Kinesin | 1611 | 1746 | 2.6e-136 | 454.6 |
| LXL04_005571 | PF18052.7 | Rx_N | 1908 | 1996 | 1.3e-39 | 134.9 |
| LXL04_005571 | PF00931.29 | NB-ARC | 2084 | 2254 | 4.9e-76 | 254.9 |
| LXL04_005571 | PF23559.2 | WHD_DRP | 2343 | 2409 | 4.7e-47 | 158.6 |
| LXL04_005571 | PF23598.2 | LRR_14 | 2489 | 2822 | 2e-54 | 185.4 |
| LXL04_005571 | PF25013.1 | LRR_Zer-1 | 2526 | 2586 | 4.2e-12 | 47.1 |
| LXL04_005571 | PF25019.1 | LRR_R13L1-DRL21 | 2618 | 2744 | 4.7e-76 | 253.5 |
| LXL04_005571 | PF23247.2 | LRR_RPS2 | 2836 | 2935 | 4.5e-26 | 92.4 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
| Protein | Organism | Description | Identity | Database | Confidence |
|---|---|---|---|---|---|
B3H6Z8 | Arabidopsis thaliana | Kinesin-like protein KIN-14J | 57.457% | Swiss-Prot | weak database homology |
F4JX00 | Arabidopsis thaliana | Kinesin-like protein KIN-14K | 50.391% | Swiss-Prot | weak database homology |
Q5JKW1 | Oryza sativa subsp. japonica | Kinesin-like protein KIN-14C | 53.510% | Swiss-Prot | weak database homology |
B9FL70 | Oryza sativa subsp. japonica | Kinesin-like protein KIN-14K | 53.822% | Swiss-Prot | weak database homology |
Q0E2L3 | Oryza sativa subsp. japonica | Kinesin-like protein KIN-14D | 51.231% | Swiss-Prot | weak database homology |