Gene Card
Gene overview
cDNA / CDS / Protein Sequences
882 bp · TkAUNG098740|TK1151|cDNA
TAGTAAGGTGCATGGTCATGGAGAGAAAATCTAAGCTTCAGTCGTCCCCTTCAACGTCATCGTCCGATCACGTTCCTCATAAATGGCTCGAGGCTCAGGATTTGCTGAAGAAGAAATTAGTCACCGAGGATGATTACACGTGGAAGTTAGGGGAAACAGAAGAGGGTTATGAGGTGGAATCGTTGAAGTACATAGGTGGAGTTGATATAAGTTTCTCGAAGGATGATCCCTCTGTAGCTTGCGGAACCCTGGTTGTATTG...
795 bp · TkAUNG098740|TK1151|CDS
ATGGTCATGGAGAGAAAATCTAAGCTTCAGTCGTCCCCTTCAACGTCATCGTCCGATCACGTTCCTCATAAATGGCTCGAGGCTCAGGATTTGCTGAAGAAGAAATTAGTCACCGAGGATGATTACACGTGGAAGTTAGGGGAAACAGAAGAGGGTTATGAGGTGGAATCGTTGAAGTACATAGGTGGAGTTGATATAAGTTTCTCGAAGGATGATCCCTCTGTAGCTTGCGGAACCCTGGTTGTATTGGATTTTAAAAC...
Protein
Download Protein FASTA264 aa · TkAUNG098740|TK1151|PROTEIN
MVMERKSKLQSSPSTSSSDHVPHKWLEAQDLLKKKLVTEDDYTWKLGETEEGYEVESLKYIGGVDISFSKDDPSVACGTLVVLDFKTLDVVYEDSSIVKIDVPYIPGFLGFREAPIFLKLLEKMQNGSHPFYPQLLMIDGNGILHPRGFGSACHLGVLANLPTIGVGKNLHHVDGLTNAKVRELLEAEEKFSIDFVSLIGDSGNTLGVALHSSKGSLKPIFISVGHRVSLPCALQIVKRTCNYRVPEPIRQADIRSRDYL...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkAUNG098740 |
|---|---|
| TK1151 ID | TkAUNG098740 |
| OH-1004 ID | LXL04_023271 |
| Relationship / confidence | Rbh Sequence Supported / Probable |
| Protein identity (%) | 100.000 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkAUNG098740 |
|---|---|
| Location | ChrUn:27870043-27872579 (+) |
| Description | Similar to Endov: Endonuclease V |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0006281 DNA repair Biological Process GO:0005634 nucleus Cellular Component GO:0005730 nucleolus Cellular Component GO:0005737 cytoplasm Cellular Component GO:0005829 cytosol Cellular Component GO:0010494 cytoplasmic stress granule Cellular Component GO:0000287 magnesium ion binding Molecular Function GO:0003677 DNA binding Molecular Function GO:0003727 single-stranded RNA binding Molecular Function GO:0016888 DNA endonuclease activity, producing 5'-phosphomonoesters Molecular Function GO:0016891 RNA endonuclease activity producing 5'-phosphomonoesters, hydrolytic mechanism Molecular Function GO:0043737 deoxyribonuclease V activity Molecular Function |
| KEGG gene cross-reference | ava:Ava_0819 cyp:PCC8801_0299 hsa:284131 mmu:338371 spo:2542434 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF04493Endonuclease_555-253 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkAUNG098740 | PF04493 | Endonuclease_5 | 55 | 253 | 3.8e-62 | 210.2 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.