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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkAUNG062400
Reference: TK1151 Chr: ChrUn Coordinates: 18059868-18061550 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

1617 bp · TkAUNG062400|TK1151|cDNA

ATGGACGTTGAATTCAAAGATATTAATGGAAACCATTTGGGTGTGAATCTTAATTCGATGGTTTCAACCGACGTCGCCGATTTGGATTCGGCCAACATTGATCTGAGAAGCGGCGACCAAATTAACTCGTGGGTGGAGTACAACGGCTCAACTCAGCAACTCTACGTCTCGATTTCATATTCCAACATAAAACCAACCTCCCCAGTTCTATCAATCCCCTTGGATCTTAACAAATACGTGAACGAGTTCATGTTCATCGG...

CDS

Download CDS FASTA

1617 bp · TkAUNG062400|TK1151|CDS

ATGGACGTTGAATTCAAAGATATTAATGGAAACCATTTGGGTGTGAATCTTAATTCGATGGTTTCAACCGACGTCGCCGATTTGGATTCGGCCAACATTGATCTGAGAAGCGGCGACCAAATTAACTCGTGGGTGGAGTACAACGGCTCAACTCAGCAACTCTACGTCTCGATTTCATATTCCAACATAAAACCAACCTCCCCAGTTCTATCAATCCCCTTGGATCTTAACAAATACGTGAACGAGTTCATGTTCATCGG...

Protein

Download Protein FASTA

538 aa · TkAUNG062400|TK1151|PROTEIN

MDVEFKDINGNHLGVNLNSMVSTDVADLDSANIDLRSGDQINSWVEYNGSTQQLYVSISYSNIKPTSPVLSIPLDLNKYVNEFMFIGFTGSTQGSTEVHSVEWWTFNSSFDDIPQNPPPPNTTFTNPSADSEKKSKCNNQLCKQGAGAVVGVVTASAFVLAACALFLIWLYSKKFKSAKKPQLFASEVIKTPKEFSYKELKLATKGFDPTRVIGHGAFGTVYRGVLSESGETIAVKRCSHTGGQGMAEFLSELSIIGTLR...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkAUNG062400
TK1151 IDTkAUNG062400
OH-1004 IDLXL04_032685
Relationship / confidenceMulti Source To Oh1004 / Complex relationship
Protein identity (%)95.900
Protein coverage (%)TK1151 100.000 / OH-1004 79.659
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkAUNG062400
LocationChrUn:18059868-18061550 (-)
DescriptionSimilar to LECRK81: L-type lectin-domain containing receptor kinase VIII.1
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g53380 L-type lectin-domain containing receptor kinase VIII.1. No verified direct reference in this release
At5g03140 Involved in resistance response to the pathogenic oomycetes Phytophthora infestans and Phytophthora capsici. No verified direct reference in this release
At5g55830 Involved in resistance response to the pathogenic oomycetes Phytophthora infestans and Phytophthora capsici. No verified direct reference in this release
At3g55550 Involved in resistance response to the pathogenic oomycetes Phytophthora infestans and Phytophthora capsici and to the pathogenic bacteria Pseudomonas syringae. No verified direct reference in this release
At2g37710 L-type lectin-domain containing receptor kinase IV.1. No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_032685 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0002229 defense response to oomycetes Biological Process
GO:0009751 response to salicylic acid Biological Process
GO:0042742 defense response to bacterium Biological Process
GO:0005576 extracellular region Cellular Component
GO:0005634 nucleus Cellular Component
GO:0005783 endoplasmic reticulum Cellular Component
GO:0005886 plasma membrane Cellular Component
GO:0009507 chloroplast Cellular Component
GO:0004674 protein serine/threonine kinase activity Molecular Function
GO:0004675 transmembrane receptor protein serine/threonine kinase activity Molecular Function
GO:0005524 ATP binding Molecular Function
GO:0030246 carbohydrate binding Molecular Function
KEGG gene cross-reference
ath:AT2G37710
ath:AT3G53380
ath:AT5G03140
ath:AT5G42120
ath:AT5G55830
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cell membrane0.845
Rank 1 · TkAUNG062400 · TK1151
Cytoplasm0.096
Rank 2 · TkAUNG062400 · TK1151
Endoplasmic reticulum0.077
Rank 3 · TkAUNG062400 · TK1151
Nucleus0.061
Rank 4 · TkAUNG062400 · TK1151
Golgi apparatus0.027
Rank 5 · TkAUNG062400 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF00139Lectin_legB3-113 aa
PF18483Lectin_L-type_dom34-102 aa
PF15756DUF4690114-176 aa
PF00069Pkinase210-479 aa
PF07714PK_Tyr_Ser-Thr211-481 aa
PF03109ABC1212-237 aa
PF07387Seadorna_VP7306-349 aa
PF17667Pkinase_fungal308-381 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkAUNG062400PF00139Lectin_legB31131.4e-29104.1
TkAUNG062400PF18483Lectin_L-type_dom341020.1113.1
TkAUNG062400PF15756DUF46901141760.2113.0
TkAUNG062400PF00069Pkinase2104793.5e-49168.3
TkAUNG062400PF07714PK_Tyr_Ser-Thr2114816.6e-46157.4
TkAUNG062400PF03109ABC12122370.0004120.3
TkAUNG062400PF07387Seadorna_VP73063490.07312.8
TkAUNG062400PF17667Pkinase_fungal3083810.000419.9
TkAUNG062400PF14531Kinase-like3154110.03913.9
TkAUNG062400PF03109ABC13163590.0004120.3
TkAUNG062400PF01636APH3163420.2611.7
TkAUNG062400PF15756DUF46903994130.2113.0

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q9LFH9Arabidopsis thalianasp|Q9LFH9|LRK81_ARATH L-type lectin-domain containing receptor kinase VIII.164.400%Swiss-ProtHigh
Q9LYX1Arabidopsis thalianasp|Q9LYX1|LRK82_ARATH L-type lectin-domain containing receptor kinase VIII.264.200%Swiss-ProtHigh
Q9FHG4Arabidopsis thalianasp|Q9FHG4|LRKS7_ARATH Probable L-type lectin-domain containing receptor kinase S.750.400%Swiss-ProtHigh
Q9M2S4Arabidopsis thalianasp|Q9M2S4|LRKS4_ARATH L-type lectin-domain containing receptor kinase S.440.500%Swiss-ProtMedium
O80939Arabidopsis thalianasp|O80939|LRK41_ARATH L-type lectin-domain containing receptor kinase IV.138.700%Swiss-ProtMedium

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