Gene Card
Gene overview
cDNA / CDS / Protein Sequences
354 bp · TkAUNG061010|TK1151|cDNA
ATGGACTGCACAGGTGCGAACACGGGTCGTGTCCCTAGACACGACTCGTGTCCAGGGCCTGTGAGATTTTTCAAGTTTGAGTTTGAGCAAGACTTGTCCAATTCCAATAATTCCAATTGCAATAATTATATCCGCGTATCTCACCAGACTTTGTCTGACGTATTGTTTTGTGCCATGTGTTCCAGTCGACGAGGAGCTGAGGTGATGCAACAGAGCGAAGAGGCGGAGAAAGAGATTATCGGTGGTAGCGATTCTGGACG...
354 bp · TkAUNG061010|TK1151|CDS
ATGGACTGCACAGGTGCGAACACGGGTCGTGTCCCTAGACACGACTCGTGTCCAGGGCCTGTGAGATTTTTCAAGTTTGAGTTTGAGCAAGACTTGTCCAATTCCAATAATTCCAATTGCAATAATTATATCCGCGTATCTCACCAGACTTTGTCTGACGTATTGTTTTGTGCCATGTGTTCCAGTCGACGAGGAGCTGAGGTGATGCAACAGAGCGAAGAGGCGGAGAAAGAGATTATCGGTGGTAGCGATTCTGGACG...
Protein
Download Protein FASTA117 aa · TkAUNG061010|TK1151|PROTEIN
MDCTGANTGRVPRHDSCPGPVRFFKFEFEQDLSNSNNSNCNNYIRVSHQTLSDVLFCAMCSSRRGAEVMQQSEEAEKEIIGGSDSGRLQFLEASGDGRQQKRDEDEGTGREEEESRS
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkAUNG061010 |
|---|---|
| TK1151 ID | TkAUNG061010 |
| OH-1004 ID | LXL04_028825 |
| Relationship / confidence | Non Reciprocal Best Hit / Complex relationship |
| Protein identity (%) | 95.100 |
| Protein coverage (%) | TK1151 35.043 / OH-1004 2.694Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkAUNG061010 |
|---|---|
| Location | ChrUn:17741446-17743592 (+) |
| Description | Similar to RE1: Retrovirus-related Pol polyprotein from transposon RE1 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0000165 MAPK cascade Biological Process GO:0002229 defense response to oomycetes Biological Process GO:0006310 DNA recombination Biological Process GO:0006508 proteolysis Biological Process GO:0007165 signal transduction Biological Process GO:0009414 response to water deprivation Biological Process GO:0009617 response to bacterium Biological Process GO:0009620 response to fungus Biological Process GO:0009723 response to ethylene Biological Process GO:0009738 abscisic acid-activated signaling pathway Biological Process GO:0009788 negative regulation of abscisic acid-activated signaling pathway Biological Process GO:0009873 ethylene-activated signaling pathway Biological Process |
| KEGG gene cross-reference | ath:AT1G08720 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.