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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkAUNG055260
Reference: TK1151 Chr: ChrUn Coordinates: 15757003-15758989 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

1178 bp · TkAUNG055260|TK1151|cDNA

CTAGTACCGCCTTTTTTACTTTTAATAATAAACCTAAACCTAAATAACAATCGAGTTGTGAGATCGCGGCTCCACTTTCAGTTTTCACAAATTAAACTCCATCCGTCTCCATTCTCCGTCTGTTCCTCTCTATCGGCGACTCCAAGCAATCGCCTCCAACTCCGTTGCCGGCGTCGCATTGACCCCTGGTCCACTGGTCGCACTTCATCTCCAACAGCTCGCACTTCGTCTCCGCCGGTCGTCAGCAAGAAGGAAACTGA...

CDS

Download CDS FASTA

675 bp · TkAUNG055260|TK1151|CDS

CTAGTACCGCCTTTTTTACTTTTAATAATAAACCTAAACCTAAATAACAATCGAGTTGTGAGATCGCGGCTCCACTTTCAGTTTTCACAAATTAAACTCCATCCGTCTCCATTCTCCGTCTGTTCCTCTCTATCGGCGACTCCAAGCAATCGCCTCCAACTCCGTTGCCGGCGTCGCATTGACCCCTGGTCCACTGGTCGCACTTCATCTCCAACAGCTCGCACTTCGTCTCCGCCGGTCGTCAGCAAGAAGGAAACTGA...

Protein

Download Protein FASTA

224 aa · TkAUNG055260|TK1151|PROTEIN

LVPPFLLLIINLNLNNNRVVRSRLHFQFSQIKLHPSPFSVCSSLSATPSNRLQLRCRRRIDPWSTGRTSSPTARTSSPPVVSKKETEFEDEEDLKSWMHKNGLPPCKVILKDRPSYDSRHPSIHCVAASEDLKAGDITFSVPSSLLVTLERVLGNETVAELLTTNKLSELACLALYLMYEKKQGKESFWYPYIEELDRQRGRGQLVVESPLLWSESELNYLTAV

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

Download Gene (CDS) Download Protein

ID Mapping

Input IDTkAUNG055260
TK1151 IDTkAUNG055260
OH-1004 IDLXL04_006058
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)88.700
Protein coverage (%)TK1151 67.411 / OH-1004 29.038
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkAUNG055260
LocationChrUn:15757003-15758989 (+)
DescriptionSimilar to SETD3: Actin-histidine N-methyltransferase
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_006058 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0018021 peptidyl-histidine methylation Biological Process
GO:0030047 actin modification Biological Process
GO:0045893 positive regulation of DNA-templated transcription Biological Process
GO:0045944 positive regulation of transcription by RNA polymerase II Biological Process
GO:0070472 regulation of uterine smooth muscle contraction Biological Process
GO:0000785 chromatin Cellular Component
GO:0005634 nucleus Cellular Component
GO:0005654 nucleoplasm Cellular Component
GO:0005737 cytoplasm Cellular Component
GO:0003713 transcription coactivator activity Molecular Function
GO:0003779 actin binding Molecular Function
GO:0016279 protein-lysine N-methyltransferase activity Molecular Function
KEGG gene cross-reference
cjc:100403104
dnm:101422009
hsa:84193
panu:100137585
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Plastid0.971
Rank 1 · TkAUNG055260 · TK1151
Nucleus0.034
Rank 2 · TkAUNG055260 · TK1151
Mitochondrion0.030
Rank 3 · TkAUNG055260 · TK1151
Cytoplasm0.021
Rank 4 · TkAUNG055260 · TK1151
Peroxisome0.012
Rank 5 · TkAUNG055260 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

No result was found for this query.

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