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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkAUNG049330
Reference: TK1151 Chr: ChrUn Coordinates: 13833684-13834370 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

360 bp · TkAUNG049330|TK1151|cDNA

ATGGGGAGTTTTCTGCCAGCGGCAACGCCATCCGGCAAGTTTACCGCTGGCGAACTCCACGCAGTGGTGGCAAACTTTGCCAGCGGTAAACTCCAGCAACGATTCTTAGCCGTTGGCAAAATTGAATTTTCCAGACCACCCCACAGAAGAATGGAGGAGTCCGCAAAAGAATGGAGGAGTCCGCAGAAGAGCACCCCGCAGAAGAATGGAGGAGTCCGCAGAAGAATGGAGGAGTCCGCAGAAGAGCACCCCGCAGAAGA...

360 bp · TkAUNG049330|TK1151|CDS

ATGGGGAGTTTTCTGCCAGCGGCAACGCCATCCGGCAAGTTTACCGCTGGCGAACTCCACGCAGTGGTGGCAAACTTTGCCAGCGGTAAACTCCAGCAACGATTCTTAGCCGTTGGCAAAATTGAATTTTCCAGACCACCCCACAGAAGAATGGAGGAGTCCGCAAAAGAATGGAGGAGTCCGCAGAAGAGCACCCCGCAGAAGAATGGAGGAGTCCGCAGAAGAATGGAGGAGTCCGCAGAAGAGCACCCCGCAGAAGA...

119 aa · TkAUNG049330|TK1151|PROTEIN

MGSFLPAATPSGKFTAGELHAVVANFASGKLQQRFLAVGKIEFSRPPHRRMEESAKEWRSPQKSTPQKNGGVRRRMEESAEEHPAEEWWSPQNNEQSAEEKMVVRSTEGHSAEVPSAES

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkAUNG049330
TK1151 IDTkAUNG049330
OH-1004 IDLXL04_002857
Relationship / confidenceMulti Source To Oh1004 / Complex relationship
Protein identity (%)76.500
Protein coverage (%)TK1151 100.000 / OH-1004 37.201
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkAUNG049330
LocationChrUn:13833684-13834370 (-)
DescriptionSimilar to MOCS2: Molybdopterin synthase catalytic subunit
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_002857 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006777 Mo-molybdopterin cofactor biosynthetic process Biological Process
GO:0032324 molybdopterin cofactor biosynthetic process Biological Process
GO:0005634 nucleus Cellular Component
GO:0005829 cytosol Cellular Component
GO:1990140 molybdopterin synthase complex Cellular Component
GO:0030366 molybdopterin synthase activity Molecular Function
KEGG gene cross-reference
ath:AT2G43760
dosa:Os02g0140300
hsa:4338
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.518
Rank 1 · TkAUNG049330 · TK1151
Nucleus0.443
Rank 2 · TkAUNG049330 · TK1151
Mitochondrion0.109
Rank 3 · TkAUNG049330 · TK1151
Cell membrane0.090
Rank 4 · TkAUNG049330 · TK1151
Endoplasmic reticulum0.049
Rank 5 · TkAUNG049330 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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No result was found for this query.

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