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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkAUNG037460
Reference: TK1151 Chr: ChrUn Coordinates: 10221259-10223647 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

552 bp · TkAUNG037460|TK1151|cDNA

ATGAGAATGATATGGACCATCCTTGAAGAGAAACCGACATATAGATTACGTGTGAGCCCTAAAATTCGAAATCTATTATGCCCGCCTCCAAAAAAGAAGCCTCTCGCAGTCGCAGTCCCGCTCAAGCTTGCAAGTTCCAATCCTTCGATCGACTCTCGTTCACCAATCACCAGGCGACTCTCTTCAATCTCGTTCACAGCTTCAGGACGCACGACGCCTCCTCACCCCTCGCAGACGCACGATTTCACCGAGAATCGCCG...

552 bp · TkAUNG037460|TK1151|CDS

ATGAGAATGATATGGACCATCCTTGAAGAGAAACCGACATATAGATTACGTGTGAGCCCTAAAATTCGAAATCTATTATGCCCGCCTCCAAAAAAGAAGCCTCTCGCAGTCGCAGTCCCGCTCAAGCTTGCAAGTTCCAATCCTTCGATCGACTCTCGTTCACCAATCACCAGGCGACTCTCTTCAATCTCGTTCACAGCTTCAGGACGCACGACGCCTCCTCACCCCTCGCAGACGCACGATTTCACCGAGAATCGCCG...

183 aa · TkAUNG037460|TK1151|PROTEIN

MRMIWTILEEKPTYRLRVSPKIRNLLCPPPKKKPLAVAVPLKLASSNPSIDSRSPITRRLSSISFTASGRTTPPHPSQTHDFTENRRFHRATANMDHIDAINMSGDEGADEIGTKPTAAHMEIAPSPSDSRKYMETMVKDALVILIPKSFRYEIVLYKMLFGRLTADEALSVVEVWITSENLS

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkAUNG037460
TK1151 IDTkAUNG037460
OH-1004 IDLXL04_037575
Relationship / confidenceRbh Below Probable Coverage Or Synteny Threshold / Review
Protein identity (%)70.100
Protein coverage (%)TK1151 91.803 / OH-1004 99.485
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkAUNG037460
LocationChrUn:10221259-10223647 (-)
DescriptionProtein of unknown function
Arabidopsis / Rice Reference Genes and Papers

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Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_037575 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)No functional description available
KEGG gene cross-referenceNo functional description available

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Nucleus0.472
Rank 1 · TkAUNG037460 · TK1151
Cytoplasm0.345
Rank 2 · TkAUNG037460 · TK1151
Cell membrane0.124
Rank 3 · TkAUNG037460 · TK1151
Mitochondrion0.090
Rank 4 · TkAUNG037460 · TK1151
Endoplasmic reticulum0.074
Rank 5 · TkAUNG037460 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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No result was found for this query.

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