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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkAUNG026230
Reference: TK1151 Chr: ChrUn Coordinates: 7029240-7032246 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

1787 bp · TkAUNG026230|TK1151|cDNA

CTTTGCCGTTTCCAGACCTACGGGTTCTTTTCCGGGAAGCTTTCTTCTTCTGTTGTTGCGTCGTCGGCGTTACAAATCAATCAAACGGAAAAAAGTGTATATCGATGCAAAAGGTTTGTAAAATCGAGTGATTGCTGATGGTGGAGGTGGATGGTAAGGAGAACGAAGGTGGTAATGGCGGTGGTAAGAAGAAGAACCGTCTATGGAGGCGGTGGGGAATTATTGGAGCTCTGATCGCTGTTTTAGTTGCCATATGTCTC...

1398 bp · TkAUNG026230|TK1151|CDS

ATGGTGGAGGTGGATGGTAAGGAGAACGAAGGTGGTAATGGCGGTGGTAAGAAGAAGAACCGTCTATGGAGGCGGTGGGGAATTATTGGAGCTCTGATCGCTGTTTTAGTTGCCATATGTCTCAATCCATGGTGGCATTCCCTCAATCTATCTCTCCTCCATAAATCGTACCTCTGTTCTGAGGATACCTGTAAATACACAGGCATCATCGAGGACTGCTGTTGCGACTTCGAAAGTGTCGACGATGTTAATGGAGCAGT...

465 aa · TkAUNG026230|TK1151|PROTEIN

MVEVDGKENEGGNGGGKKKNRLWRRWGIIGALIAVLVAICLNPWWHSLNLSLLHKSYLCSEDTCKYTGIIEDCCCDFESVDDVNGAVLHPLLQELVTTPFFRYFKVKLWCDCPFWPDDGMCKIRDCNVCECPEDEFPESFKTPLQNILPKEDPVCQEGKPEATVDRTLDDKSFKGWVEVDNPWTYDDETDNEEMTYVNLLLNPEHHTRYTGPSARRIWDAIYSEHCPRYAYGEICPEKKVLYKLISGLHSSISIHIAADY...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkAUNG026230
TK1151 IDTkAUNG026230
OH-1004 IDLXL04_037893
Relationship / confidenceMulti Source To Oh1004 / Complex relationship
Protein identity (%)99.600
Protein coverage (%)TK1151 100.000 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkAUNG026230
LocationChrUn:7029240-7032246 (+)
DescriptionSimilar to AERO1: Endoplasmic reticulum oxidoreductin-1
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g72280 Essential oxidoreductase that oxidizes proteins in the endoplasmic reticulum to produce disulfide bonds. No verified direct reference in this release
At2g38960 Essential oxidoreductase that oxidizes proteins in the endoplasmic reticulum to produce disulfide bonds. No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_037893 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006457 protein folding Biological Process
GO:0018401 peptidyl-proline hydroxylation to 4-hydroxy-L-proline Biological Process
GO:0030070 insulin processing Biological Process
GO:0030198 extracellular matrix organization Biological Process
GO:0034975 protein folding in endoplasmic reticulum Biological Process
GO:0034976 response to endoplasmic reticulum stress Biological Process
GO:0042593 glucose homeostasis Biological Process
GO:0045454 cell redox homeostasis Biological Process
GO:0051209 release of sequestered calcium ion into cytosol Biological Process
GO:0051604 protein maturation Biological Process
GO:0005615 extracellular space Cellular Component
GO:0005634 nucleus Cellular Component
KEGG gene cross-reference
ath:AT1G72280
ath:AT2G38960
bta:100125317
hsa:56605
mmu:67475
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Endoplasmic reticulum0.546
Rank 1 · TkAUNG026230 · TK1151
Golgi apparatus0.143
Rank 2 · TkAUNG026230 · TK1151
Cytoplasm0.117
Rank 3 · TkAUNG026230 · TK1151
Nucleus0.110
Rank 4 · TkAUNG026230 · TK1151
Cell membrane0.083
Rank 5 · TkAUNG026230 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF04137ERO188-431 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkAUNG026230PF04137ERO1884312.4e-110369.7

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q9C7S7Arabidopsis thalianasp|Q9C7S7|ERO1_ARATH Endoplasmic reticulum oxidoreductin-166.700%Swiss-ProtHigh
Q7X9I4Arabidopsis thalianasp|Q7X9I4|ERO2_ARATH Endoplasmic reticulum oxidoreductin-261.600%Swiss-ProtHigh

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