Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1173 bp · TkAUNG016320|TK1151|cDNA
CGGCCATGGATGAGGGTGTGGACTTACCAATCCAATTGCAACAATATAGATTATTAAAAATAGTATCACCAATTTGTCGATTGGTAGATGCCGTTTTGGATTTTTCTTCACGCCATCTACTACTTGTTCAATTAATAACCCCTCACTCAACCTCTGCATATATCTGTAAATAATACTAATCGATGCAAATATCATCGTCATCTCGTCTGATTACACTATGTTACCGGCGGTGGTCGCGATTCTCGTAAAACCAATACCAA...
849 bp · TkAUNG016320|TK1151|CDS
ATGTTACCGGCGGTGGTCGCGATTCTCGTAAAACCAATACCAATTGTCAACCAATTTCATAAGTTCGACATTCATCGGAAAACCCCCTTTTCAACTCCGGCTTTTCGTACCTTGAAAGAATCTGCAATTGTTTATCCGAAATCTGTTAGACTGAAGAAAATGAAGGTGTCTGGATCGATCGAGGCGGGGATCATCGACGTTGGTGGTGGCGATGAACGTTTTAGCCCTTCAGTTTCTGCTTTGGAACAGGAAACTTTGAT...
Protein
Download Protein FASTA282 aa · TkAUNG016320|TK1151|PROTEIN
MLPAVVAILVKPIPIVNQFHKFDIHRKTPFSTPAFRTLKESAIVYPKSVRLKKMKVSGSIEAGIIDVGGGDERFSPSVSALEQETLIDSGGGSFHQTVGGLHTIVNRLSKWVVAALFGGFILLRHDALALWAAMGSVLNVILSVTLKQILKQERPVSGVSSGHGMPSSHAQSIFYATMILISSIITGQGLNGVTGIFSVLIVALGSYFSWLRILLRYHTTSQVVVGAIVGSIFSVLWFWAWEAIVFKAYNSILWVRILVI...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkAUNG016320 |
|---|---|
| TK1151 ID | TkAUNG016320 |
| OH-1004 ID | LXL04_024602 |
| Relationship / confidence | Multi Source To Oh1004 / Complex relationship |
| Protein identity (%) | 89.500 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkAUNG016320 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | ChrUn:4361601-4363092 (+) | |||||||||
| Description | Similar to LPPE2: Lipid phosphate phosphatase epsilon 2, chloroplastic | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0006487 protein N-linked glycosylation Biological Process GO:0006651 diacylglycerol biosynthetic process Biological Process GO:0008610 lipid biosynthetic process Biological Process GO:0005783 endoplasmic reticulum Cellular Component GO:0005789 endoplasmic reticulum membrane Cellular Component GO:0009507 chloroplast Cellular Component GO:0009706 chloroplast inner membrane Cellular Component GO:0008195 phosphatidate phosphatase activity Molecular Function GO:0042392 sphingosine-1-phosphate phosphatase activity Molecular Function GO:0047874 dolichyldiphosphatase activity Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT3G50920 ath:AT5G66450 sce:YGR036C These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF02681DUF212130-182 aaPF01569PAP2157-241 aaPF02681DUF212218-232 aaPF11368DUF3169223-270 aaPF01569PAP2234-271 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkAUNG016320 | PF02681 | DUF212 | 130 | 182 | 0.0096 | 16.8 |
| TkAUNG016320 | PF01569 | PAP2 | 157 | 241 | 1.8e-06 | 28.4 |
| TkAUNG016320 | PF02681 | DUF212 | 218 | 232 | 0.0096 | 16.8 |
| TkAUNG016320 | PF11368 | DUF3169 | 223 | 270 | 3.2 | 8.1 |
| TkAUNG016320 | PF01569 | PAP2 | 234 | 271 | 1.8e-06 | 28.4 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.