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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkAUNG007670
Reference: TK1151 Chr: ChrUn Coordinates: 2024176-2024565 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

390 bp · TkAUNG007670|TK1151|cDNA

ATGTACTCGGGGCCTCCCCCGATTGCTGGAAGATGCGCGCGATACGATAAAGGCCCCTGGGAGAAACCAATGAAAAGCCAGGGTAGAGCCTCGGAGCCGGCCCAAGCGAAGATCGGCACTCGCAGGCTTGAGGAGCAGCCCGAAAAAGGGAAAGCCGTGGAGACGGCAGACTCGCCAGTCAGGCACACCGTGAGGCTGACTACAGCAGACCGGGAGGTTACAATTCCTGTTTTCCTGTTTAAATTTCCGGGAGTGAATGT...

390 bp · TkAUNG007670|TK1151|CDS

ATGTACTCGGGGCCTCCCCCGATTGCTGGAAGATGCGCGCGATACGATAAAGGCCCCTGGGAGAAACCAATGAAAAGCCAGGGTAGAGCCTCGGAGCCGGCCCAAGCGAAGATCGGCACTCGCAGGCTTGAGGAGCAGCCCGAAAAAGGGAAAGCCGTGGAGACGGCAGACTCGCCAGTCAGGCACACCGTGAGGCTGACTACAGCAGACCGGGAGGTTACAATTCCTGTTTTCCTGTTTAAATTTCCGGGAGTGAATGT...

129 aa · TkAUNG007670|TK1151|PROTEIN

MYSGPPPIAGRCARYDKGPWEKPMKSQGRASEPAQAKIGTRRLEEQPEKGKAVETADSPVRHTVRLTTADREVTIPVFLFKFPGVNVGSADGGSGVNIQPKASWGSAIAKHCGHHSSSYVWLAYNLRAS

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkAUNG007670
TK1151 IDTkAUNG007670
OH-1004 IDLXL04_029491
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)92.500
Protein coverage (%)TK1151 93.023 / OH-1004 31.250
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkAUNG007670
LocationChrUn:2024176-2024565 (-)
DescriptionSimilar to ND5: NADH-ubiquinone oxidoreductase chain 5
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_029491 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0015990 electron transport coupled proton transport Biological Process
GO:0042773 ATP synthesis coupled electron transport Biological Process
GO:0005743 mitochondrial inner membrane Cellular Component
GO:0009536 plastid Cellular Component
GO:0045271 respiratory chain complex I Cellular Component
GO:0003954 NADH dehydrogenase activity Molecular Function
GO:0008137 NADH dehydrogenase (ubiquinone) activity Molecular Function
KEGG gene cross-referenceNo functional description available

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.404
Rank 1 · TkAUNG007670 · TK1151
Nucleus0.391
Rank 2 · TkAUNG007670 · TK1151
Mitochondrion0.184
Rank 3 · TkAUNG007670 · TK1151
Cell membrane0.105
Rank 4 · TkAUNG007670 · TK1151
Endoplasmic reticulum0.057
Rank 5 · TkAUNG007670 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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No result was found for this query.

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