Gene Card
Gene overview
cDNA / CDS / Protein Sequences
336 bp · TkA08G398090|TK1151|cDNA
ATGCGTGGCTGTCTATGTCGCCGAATCACACTGCCGATTTCAATGGAGGTCGGCAGTTCTTGCGTCGTTCAAGGAGGTCGCCACTTTCTGATTTTCTGTTTGCATTCAATCTCAATCGACAAGGTGGGCCTGGGGTGTCTCTGGTACCTACGTGGCTCCGCCCTTGGTTCTATAGAACTAGTATTATACCCCTTCGTTGAAGGGGAAAGTTATAATATTTCTGTAAATATATTCATTAACATAGACCCTCCATTCAAACC...
336 bp · TkA08G398090|TK1151|CDS
ATGCGTGGCTGTCTATGTCGCCGAATCACACTGCCGATTTCAATGGAGGTCGGCAGTTCTTGCGTCGTTCAAGGAGGTCGCCACTTTCTGATTTTCTGTTTGCATTCAATCTCAATCGACAAGGTGGGCCTGGGGTGTCTCTGGTACCTACGTGGCTCCGCCCTTGGTTCTATAGAACTAGTATTATACCCCTTCGTTGAAGGGGAAAGTTATAATATTTCTGTAAATATATTCATTAACATAGACCCTCCATTCAAACC...
Protein
Download Protein FASTA111 aa · TkA08G398090|TK1151|PROTEIN
MRGCLCRRITLPISMEVGSSCVVQGGRHFLIFCLHSISIDKVGLGCLWYLRGSALGSIELVLYPFVEGESYNISVNIFINIDPPFKPPRFNLKLLSVLKVLQLVCQFQPPR
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA08G398090 |
|---|---|
| TK1151 ID | TkA08G398090 |
| OH-1004 ID | LXL04_037935 |
| Relationship / confidence | Non Reciprocal Best Hit / Complex relationship |
| Protein identity (%) | 89.700 |
| Protein coverage (%) | TK1151 26.126 / OH-1004 17.365Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA08G398090 |
|---|---|
| Location | Chr08:101437105-101442787 (+) |
| Description | Similar to HIPP16: Heavy metal-associated isoprenylated plant protein 16 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0002758 innate immune response-activating signaling pathway Biological Process GO:0006952 defense response Biological Process GO:0009626 plant-type hypersensitive response Biological Process GO:0042742 defense response to bacterium Biological Process GO:0051707 response to other organism Biological Process GO:0062207 regulation of pattern recognition receptor signaling pathway Biological Process GO:0005634 nucleus Cellular Component GO:0005737 cytoplasm Cellular Component GO:0005829 cytosol Cellular Component GO:0005524 ATP binding Molecular Function GO:0043531 ADP binding Molecular Function GO:0046872 metal ion binding Molecular Function |
| KEGG gene cross-reference | ath:AT3G07600 ath:AT5G48290 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.