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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkA08G291550
Reference: TK1151 Chr: Chr08 Coordinates: 75592414-75592932 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

519 bp · TkA08G291550|TK1151|cDNA

ATGGGTGGTGCAGACCAAGAAGAGGAGCGTGGTTCACCGGTCGCGGTTAACCGTGGAGATGGTGGAGGAGAAAGGGAGGTATCTGATTCCGGCGATGGAAGTGGTGGTAATGGTGGCAATAATAATAACGTGGATTCAGCTTATCAACAGTGGTATGATCTGCAGCAGGTTTCAAGGTGGATTGAGCAGATTCTTCCATTTTCTTTGCTGTTATTGATCGTTTTCATTCGTCAGCACTTGCAAGGTACAAAAATTGGCCA...

519 bp · TkA08G291550|TK1151|CDS

ATGGGTGGTGCAGACCAAGAAGAGGAGCGTGGTTCACCGGTCGCGGTTAACCGTGGAGATGGTGGAGGAGAAAGGGAGGTATCTGATTCCGGCGATGGAAGTGGTGGTAATGGTGGCAATAATAATAACGTGGATTCAGCTTATCAACAGTGGTATGATCTGCAGCAGGTTTCAAGGTGGATTGAGCAGATTCTTCCATTTTCTTTGCTGTTATTGATCGTTTTCATTCGTCAGCACTTGCAAGGTACAAAAATTGGCCA...

172 aa · TkA08G291550|TK1151|PROTEIN

MGGADQEEERGSPVAVNRGDGGGEREVSDSGDGSGGNGGNNNNVDSAYQQWYDLQQVSRWIEQILPFSLLLLIVFIRQHLQGTKIGQITVLPCAYQLRVPALQAFYFTSASFTDSVDFGFNRFCFNRCCFNRFWIQSVLLQSVLMLSFFFFFFIQALDIQIGLNPNMDLIIP

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA08G291550
TK1151 IDTkA08G291550
OH-1004 IDLXL04_005156
Relationship / confidenceMulti Source To Oh1004 / Complex relationship
Protein identity (%)84.700
Protein coverage (%)TK1151 64.535 / OH-1004 50.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA08G291550
LocationChr08:75592414-75592932 (+)
DescriptionProtein of unknown function
Arabidopsis / Rice Reference Genes and Papers

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Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_005156 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)No functional description available
KEGG gene cross-referenceNo functional description available

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Endoplasmic reticulum0.438
Rank 1 · TkA08G291550 · TK1151
Nucleus0.274
Rank 2 · TkA08G291550 · TK1151
Cytoplasm0.196
Rank 3 · TkA08G291550 · TK1151
Golgi apparatus0.149
Rank 4 · TkA08G291550 · TK1151
Cell membrane0.144
Rank 5 · TkA08G291550 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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No result was found for this query.

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