Gene Card
Gene overview
cDNA / CDS / Protein Sequences
873 bp · TkA08G131820|TK1151|cDNA
ATGGGTTTTGCCCTCGTTAGATTCTTGCTTGGAACCATGACTTACCGGTTTCAGGAGAAAAACGAGGATACAAGTGCGTTTATTAGAATCGGTCAGGTGTTCGTTGAAGCCGCCTGGAATTGTGGGGATGGACGGAGTGAAGAAATTGAAGTGCGTGTCGATGATCAAATAATTGGCCAAAAGGACTGCTTCAAGTATTTGGGGTCTATGATCCATAAAGAAGGGGGTGTTGATGAGGATGTCACACACCGTATAAAGGC...
873 bp · TkA08G131820|TK1151|CDS
ATGGGTTTTGCCCTCGTTAGATTCTTGCTTGGAACCATGACTTACCGGTTTCAGGAGAAAAACGAGGATACAAGTGCGTTTATTAGAATCGGTCAGGTGTTCGTTGAAGCCGCCTGGAATTGTGGGGATGGACGGAGTGAAGAAATTGAAGTGCGTGTCGATGATCAAATAATTGGCCAAAAGGACTGCTTCAAGTATTTGGGGTCTATGATCCATAAAGAAGGGGGTGTTGATGAGGATGTCACACACCGTATAAAGGC...
Protein
Download Protein FASTA290 aa · TkA08G131820|TK1151|PROTEIN
MGFALVRFLLGTMTYRFQEKNEDTSAFIRIGQVFVEAAWNCGDGRSEEIEVRVDDQIIGQKDCFKYLGSMIHKEGGVDEDVTHRIKAGWLKWRAAAGVLCDKRVPVQLKGKFYKVAIRPALLYGSECWAIKKEHERKMDVAEMRMLRWISGKTLWDLVPNATIRSSLGVATITEKLREGRLRWLGHVHRRQPIEPVRRVESISVDGVRGRGRPKKKWDDCLRCDMKVLDISVDMSADRKLILYARRDHFEHGGFLNKALL...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA08G131820 |
|---|---|
| TK1151 ID | TkA08G131820 |
| OH-1004 ID | LXL04_031830 |
| Relationship / confidence | Non Reciprocal Best Hit / Complex relationship |
| Protein identity (%) | 39.500 |
| Protein coverage (%) | TK1151 27.931 / OH-1004 6.593Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA08G131820 |
|---|---|
| Location | Chr08:34207776-34210079 (-) |
| Description | Similar to NPF5.10: Protein NRT1/ PTR FAMILY 5.10 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0009624 response to nematode Biological Process GO:0015706 nitrate transmembrane transport Biological Process GO:0055085 transmembrane transport Biological Process GO:0000325 plant-type vacuole Cellular Component GO:0005634 nucleus Cellular Component GO:0009705 plant-type vacuole membrane Cellular Component GO:0016020 membrane Cellular Component GO:0022857 transmembrane transporter activity Molecular Function GO:0042937 tripeptide transmembrane transporter activity Molecular Function GO:0071916 dipeptide transmembrane transporter activity Molecular Function GO:0080054 low-affinity nitrate transmembrane transporter activity Molecular Function |
| KEGG gene cross-reference | ath:AT1G22540 ath:AT1G72125 ath:AT1G72140 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF02178AT_hook208-216 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA08G131820 | PF02178 | AT_hook | 208 | 216 | 0.24 | 12.1 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.