TkA08G131180 | RubberDandelionOmics

Gene overview

TkA08G131180

Reference: TK1151 Chr: Chr08 Coordinates: 34050356-34052453 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

1831 bp · TkA08G131180|TK1151|cDNA

ATTTGAATCTCATCGGTTTACCGAAATCGTAGACTCATATATCATCTATTTATACAACAAGCCCCTCCTTTCGCTTCAATAACATAAAACTCACAATACCCCACACACACACACACACACCCACACACACACACACACAAAGATAGAACCAGTAGCCATGAACTCTGAAACTGAAATCAACCCACATGTAGTCTTCGTACCATTTCCCGCACAAAGCCACATCAAATGTATGCTCAAATTAGCAAGACTACTTCACCAAA...

CDS

Download CDS FASTA

1443 bp · TkA08G131180|TK1151|CDS

ATGAACTCTGAAACTGAAATCAACCCACATGTAGTCTTCGTACCATTTCCCGCACAAAGCCACATCAAATGTATGCTCAAATTAGCAAGACTACTTCACCAAAAAGGCCTCCAAATAACCTTCGTCAACACAGAATATAACCACAACCGGTTCCTGAACTCCGGTGGACCACACTGTATGGACGGTGGACCAGGGTTCCGGTTTGAAACCATTCCCGATGGTCTTGATAACAGCAACATGGATGCCACTCAAGACATGAA...

Protein

Download Protein FASTA

480 aa · TkA08G131180|TK1151|PROTEIN

MNSETEINPHVVFVPFPAQSHIKCMLKLARLLHQKGLQITFVNTEYNHNRFLNSGGPHCMDGGPGFRFETIPDGLDNSNMDATQDMNELCKSLLTNCLDPFLDLVGRLESPVTCVISDGFMPFVTEAAEKIRVPIMQFWTIAACAFMGFNEAPNLLEKGIIPLKDDSCLTNGYLDTTIDWIPGMEGFRLKDFPGYVRTTYPNDPSFTYVIESSKTTRKVSHIILHTFQELESNIIEVLKSKFPNLYTIGPLQLHLNNHIT...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

ID Mapping

Input ID	`TkA08G131180`
TK1151 ID	TkA08G131180
OH-1004 ID	LXL04_031814
Relationship / confidence	Multi Source To Oh1004 / Complex relationship
Protein identity (%)	95.600
Protein coverage (%)	TK1151 100.000 / OH-1004 99.586 Coverage and evidence Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.
Source version	TK1151 / GWHBCHF00000000

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SNP / Indel variants and carrier samplesCRA009020 · TK1151

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Basic Information and Functional Annotation

Gene ID TkA08G131180

Location Chr08:34050356-34052453 (+)

Description Similar to UGT85C2: UDP-glycosyltransferase 85C2

Arabidopsis / Rice Reference Genes and Papers

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Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At1g22400`	Involved in the O-glucosylation of trans-zeatin and dihydrozeatin.	N-glucosylation of cytokinins by glycosyltransferases of Arabidopsis thaliana.2004 · DOI: 10.1074/jbc.m409569200

Rice

No hit for this species in the current source table.

Functional annotation source

View annotation sources

Functional annotation source: OH1004 · LXL04_031814 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)

GO:1900994 (-)-secologanin biosynthetic process Biological Process

GO:0005737 cytoplasm Cellular Component

GO:0015020 glucuronosyltransferase activity Molecular Function

GO:0035251 UDP-glucosyltransferase activity Molecular Function

GO:0080043 quercetin 3-O-glucosyltransferase activity Molecular Function

GO:0080044 quercetin 7-O-glucosyltransferase activity Molecular Function

GO:0102377 steviol 13-O glucosyltransferase activity Molecular Function

GO:0102378 steviolmonoside glucosyltransferase activity Molecular Function

KEGG gene cross-reference

ag:BAK55737

ag:BAK55749

ath:AT1G22380

These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

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Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.744

Rank 1 · TkA08G131180 · TK1151

Nucleus0.187

Rank 2 · TkA08G131180 · TK1151

Endoplasmic reticulum0.075

Rank 3 · TkA08G131180 · TK1151

Peroxisome0.068

Rank 4 · TkA08G131180 · TK1151

Plastid0.057

Rank 5 · TkA08G131180 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

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Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF26168Glyco_transf_N11-45 aa

PF04101Glyco_tran_28_C11-46 aa

PF00201UDPGT83-144 aa

PF26168Glyco_transf_N114-132 aa

PF26168Glyco_transf_N212-252 aa

PF00201UDPGT284-416 aa

PF06722EryCIII-like_C355-422 aa

PF04101Glyco_tran_28_C373-433 aa

Gene ID	Domain ID	Domain Name	Start aa	End aa	E-value	Score
TkA08G131180	`PF26168`	Glyco_transf_N	11	45	2.7e-08	34.7
TkA08G131180	`PF04101`	Glyco_tran_28_C	11	46	0.12	13.1
TkA08G131180	`PF00201`	UDPGT	83	144	8.1e-25	88.3
TkA08G131180	`PF26168`	Glyco_transf_N	114	132	2.7e-08	34.7
TkA08G131180	`PF26168`	Glyco_transf_N	212	252	2.7e-08	34.7
TkA08G131180	`PF00201`	UDPGT	284	416	8.1e-25	88.3
TkA08G131180	`PF06722`	EryCIII-like_C	355	422	0.0037	18.0
TkA08G131180	`PF04101`	Glyco_tran_28_C	373	433	0.12	13.1

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

Protein	Organism	Description	Identity	Database	Confidence
`Q9SK82`	Arabidopsis thaliana	sp\|Q9SK82\|U85A1_ARATH UDP-glycosyltransferase 85A1	52.400%	Swiss-Prot	High

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