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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA08G112140
Reference: TK1151 Chr: Chr08 Coordinates: 29160554-29165536 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

696 bp · TkA08G112140|TK1151|cDNA

ATCAGGCGGAGACACCTCGAGCCATGAAATCACGAAGTGACGATGACGACTGGGAATCGAAGTTCGAGGATCAACGAAGGAAGATAATAAAATTGTGGGACGAATGCAACATTCCATTGATTCACAGGACCTACTTTTTCTTGCTCATTCAAGGAGACCCATCCGACTCAGTCTACATCGAGGTCGAGCTCCGACGTCTATCCTTCCTCCAAAAAGCAGTCGACCACGCCTCAAGCATAAAGGCAATGACTGCGGAGAGG...

CDS

Download CDS FASTA

2472 bp · TkA08G112140|TK1151|CDS

ATGAGAGCGCTTACTGGAGACGATATAAATCACGGCGGTGGACAAGAGCCAGGCGCAAATGAAGAAAAAATATTCGTCTCTGTGAGGGTGAGGCCTTTAAACGAAAAGGAAATTGCCAAAAATAATTCTTGCGATTGGGAATGCATTAGCAATGACACCATTATCTACAAAAACGCTGTAACTGAACGATCAAACTACCCAAATGCCTACACTTTTGATAGAGTATACGGATGTGATAGCAATACAAGACAAGTGTACGA...

Protein

Download Protein FASTA

823 aa · TkA08G112140|TK1151|PROTEIN

MRALTGDDINHGGGQEPGANEEKIFVSVRVRPLNEKEIAKNNSCDWECISNDTIIYKNAVTERSNYPNAYTFDRVYGCDSNTRQVYEEGVKRVALSALNGINSSVFAYGQTSSGKTYTMSGITQYAISDIFDYIKNQNDREFVLKFSAIEIYNECVRDLLSADNTPLRLLDDPVKGTVVDKLTEVRLTDWTHLMELLAVCEAQRKIGETSMNEMSSRSHQILRLTIESSPSEFARIGSASSLTASVNFVDLAGSERASQT...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA08G112140
TK1151 IDTkA08G112140
OH-1004 IDLXL04_031535
Relationship / confidenceRbh Sequence Supported / Probable
Protein identity (%)93.600
Protein coverage (%)TK1151 100.000 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA08G112140
LocationChr08:29160554-29165536 (-)
DescriptionSimilar to KIN7E: Kinesin-like protein KIN-7E
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At2g21300 Kinesin-like protein KIN-7E. No verified direct reference in this release
At4g38950 Kinesin-like protein KIN-7F. No verified direct reference in this release
At5g42490 Kinesin-like protein KIN-7J. No verified direct reference in this release
At4g24170 Kinesin-like protein KIN-7I. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os04g0538800 Binds ATP/ADP in vitro. No verified direct reference in this release
Os02g0645100 Kinesin-like protein KIN-7C. No verified direct reference in this release
Os08g0547500 Kinesin-like protein KIN-7H. No verified direct reference in this release
Os02g0644400 Putative inactive kinesin-like protein KIN-7B. No verified direct reference in this release
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_031535 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0007018 microtubule-based movement Biological Process
GO:0005737 cytoplasm Cellular Component
GO:0005874 microtubule Cellular Component
GO:0003777 microtubule motor activity Molecular Function
GO:0005524 ATP binding Molecular Function
GO:0008017 microtubule binding Molecular Function
KEGG gene cross-reference
ath:AT2G21300
ath:AT3G51150
dosa:Os08g0547500
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.664
Rank 1 · TkA08G112140 · TK1151
Nucleus0.263
Rank 2 · TkA08G112140 · TK1151
Cell membrane0.136
Rank 3 · TkA08G112140 · TK1151
Golgi apparatus0.069
Rank 4 · TkA08G112140 · TK1151
Lysosome / Vacuole0.058
Rank 5 · TkA08G112140 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF16796Microtub_bd24-160 aa
PF00225Kinesin29-345 aa
PF04344CheZ301-422 aa
PF02181FH2342-421 aa
PF13851GAS343-420 aa
PF11995DUF3490347-401 aa
PF14362DUF4407349-422 aa
PF04102SlyX352-384 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA08G112140PF16796Microtub_bd241601.3e-2177.9
TkA08G112140PF00225Kinesin293458.9e-100334.6
TkA08G112140PF04344CheZ3014220.3811.3
TkA08G112140PF02181FH23424210.01515.2
TkA08G112140PF13851GAS3434200.02714.6
TkA08G112140PF11995DUF34903474016.5e-57192.5
TkA08G112140PF14362DUF44073494220.1112.5
TkA08G112140PF04102SlyX3523848.57.8
TkA08G112140PF28743IPGAL2_N3553823.18.3
TkA08G112140PF25764KIF21A_4th3594190.4211.0
TkA08G112140PF25101Spectrin_73614070.06214.3
TkA08G112140PF14197Cep57_CLD_23623770.4911.2
TkA08G112140PF28743IPGAL2_N3894133.18.3
TkA08G112140PF04102SlyX3914088.57.8
TkA08G112140PF14197Cep57_CLD_23924180.4911.2
TkA08G112140PF18606HTH_534024300.05913.8

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
F4IGL2Arabidopsis thalianasp|F4IGL2|KN7E_ARATH Kinesin-like protein KIN-7E45.500%Swiss-ProtMedium
F4JUI9Arabidopsis thalianasp|F4JUI9|KN7F_ARATH Kinesin-like protein KIN-7F44.000%Swiss-ProtMedium
Q9FIG8Arabidopsis thalianasp|Q9FIG8|KN7J_ARATH Kinesin-like protein KIN-7J50.000%Swiss-ProtHigh
F4JQ51Arabidopsis thalianasp|F4JQ51|KN7I_ARATH Kinesin-like protein KIN-7I45.900%Swiss-ProtMedium
Q7X7H4Oryza sativa subsp. japonicasp|Q7X7H4|KN7F_ORYSJ Kinesin-like protein KIN-7F41.800%Swiss-ProtMedium
Q6H638Oryza sativa subsp. japonicasp|Q6H638|KN7C_ORYSJ Kinesin-like protein KIN-7C43.000%Swiss-ProtMedium
Q6Z9D2Oryza sativa subsp. japonicasp|Q6Z9D2|KN7H_ORYSJ Kinesin-like protein KIN-7H40.800%Swiss-ProtMedium
Q6H647Oryza sativa subsp. japonicasp|Q6H647|KN7B_ORYSJ Putative inactive kinesin-like protein KIN-7B (Fragment)42.800%Swiss-ProtMedium

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