Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1373 bp · TkA08G085190|TK1151|cDNA
GAAAAGTAGGTGACCCGTTCATCTATATTTACAGAAAACTTCATTCGTGATTTTTTATCATTATCATAAACCCATTGATTAGAATATCTGGGAGGAGTGACAGATTGCCATATTTTGGATTCTGATTTAACTAACACTATGGATGTTCACCGCAGATAACTTGACGACCGATTGCAACCATGGATGCATTAAGTAATGACATCTTCTACGATATCCTAAGACGTGTAGACGGTGCAACCCTAGCAAGCGCATCGTGTGCT...
681 bp · TkA08G085190|TK1151|CDS
ATGTTTACAATGGTTGGTTTTCCGACTGTCCTTTCAGAATCGATCTTTTTGCATGTTCATATAGAGATGATGATCATGAAGAATTTTGTAGGAGAAGTTACTCGTTCGGTTTCTGAAGGCCTACCGCTCATCACCTCTCTCGAAAAAGAGAGAAAAGATGGGAAACTATGGCAAGAACTTCATGATGGGATTAAACTTAGTTGGATAATCGTTAATGCTAAAGCAAAACAGGCTGCAAATTTATCTAGTTGGTGTGCAAT...
Protein
Download Protein FASTA226 aa · TkA08G085190|TK1151|PROTEIN
MFTMVGFPTVLSESIFLHVHIEMMIMKNFVGEVTRSVSEGLPLITSLEKERKDGKLWQELHDGIKLSWIIVNAKAKQAANLSSWCAIDGQRHWPTNKDFLLQFGSVVPAKEILPYRVVKCIIAMKFRVIDVEGSGTHMALNLTDVCMQLGDVEGVHVNGRSGLLVLKEALRCNRSKNYGLVVESCRLYAKAQSEIKEEKIRHENMLERLHILGGITAFVLVFCYFL
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA08G085190 |
|---|---|
| TK1151 ID | TkA08G085190 |
| OH-1004 ID | LXL04_018830 |
| Relationship / confidence | Non Reciprocal Best Hit / Complex relationship |
| Protein identity (%) | 93.600 |
| Protein coverage (%) | TK1151 89.381 / OH-1004 48.675Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA08G085190 |
|---|---|
| Location | Chr08:21944822-21948346 (-) |
| Description | Similar to At3g44326: F-box protein At3g44326 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0009620 response to fungus Biological Process GO:0016567 protein ubiquitination Biological Process GO:0019218 regulation of steroid metabolic process Biological Process GO:0009507 chloroplast Cellular Component GO:0016020 membrane Cellular Component GO:0019005 SCF ubiquitin ligase complex Cellular Component |
| KEGG gene cross-reference | ath:AT2G27310 ath:AT2G36090 ath:AT3G44326 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.