Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1497 bp · TkA08G072480|TK1151|cDNA
AGTTTTTATACAATAAGATATATAGAGAATCGACATTGCGTGGGGTCACCTCACAATCATATTCCTTGAAGATATTCATAATTTTGATAATATCACAACCTTCCATTTCTTCTTCGATCCGATTTCCCCCCATTTCTCGATTCCTCTCTTAACACGGATTCTCTGCAATCTTTCACAGAAATATTCCATCGTTTCTTCCGATTCTAACAACTATATTCCCTCCCTTTTTTCCACTTTGAATCAATCCTATTTGTTTCCAA...
846 bp · TkA08G072480|TK1151|CDS
ATGAAGATCGAGGATTTAGATGATGCTTCCTCCGATGTGAAAGTTATTAATTCTATCGTGGAGTACGATTCCGGGCGTCAGATTGTCGCCGTTGATGCGAAGAGAGCTTTAGTCGGAGCCGGTGCTCGGATTTTGTTTTACCCCACGCTTTTGTATAATGTTTTCCGTAACAAAATTCAAGCAGAGTTCAGGTGGTGGGATCATGTTGATCAGTTTATTCTTCTCGGTGCTGTTCCATTTCCAAAAGACGTCCCTCGTTT...
Protein
Download Protein FASTA281 aa · TkA08G072480|TK1151|PROTEIN
MKIEDLDDASSDVKVINSIVEYDSGRQIVAVDAKRALVGAGARILFYPTLLYNVFRNKIQAEFRWWDHVDQFILLGAVPFPKDVPRLKQLDVGGVITLNEPYETLVPSSLYRTYDIDHLVIPTRDYLFAPSFIDIDRAVNFIHKNASIGRTTYVHCKAGRGRSTTIVLCYMVEYKHMTPVAALEHVRSRRPRVQLAPSQWKAVQEYKQWRRMKMTRMPLGSGDAVLITKADLEGYSKGKEMVVVPRSGVMIAKLSCLFAA...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA08G072480 |
|---|---|
| TK1151 ID | TkA08G072480 |
| OH-1004 ID | LXL04_018622 |
| Relationship / confidence | Rbh High Identity Coverage Synteny / Strict |
| Protein identity (%) | 98.900 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA08G072480 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr08:18701947-18704141 (+) | |||||||||
| Description | Similar to PTPMT2: Phosphatidylglycerophosphate phosphatase PTPMT2 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0006655 phosphatidylglycerol biosynthetic process Biological Process GO:0032049 cardiolipin biosynthetic process Biological Process GO:0046488 phosphatidylinositol metabolic process Biological Process GO:0048364 root development Biological Process GO:0005634 nucleus Cellular Component GO:0005737 cytoplasm Cellular Component GO:0005739 mitochondrion Cellular Component GO:0005743 mitochondrial inner membrane Cellular Component GO:0004722 protein serine/threonine phosphatase activity Molecular Function GO:0004725 protein tyrosine phosphatase activity Molecular Function GO:0008962 phosphatidylglycerophosphatase activity Molecular Function GO:0102091 phosphatidylinositol-5-phosphate phosphatase activity Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT2G35680 ath:AT5G56610 hsa:114971 mmu:66461 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF22784PTP-SAK81-185 aaPF22785Tc-R-P85-173 aaPF00782DSPc105-208 aaPF22741PTP-NADK128-176 aaPF14566PTPlike_phytase129-170 aaPF00102Y_phosphatase148-201 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA08G072480 | PF22784 | PTP-SAK | 81 | 185 | 2.1e-12 | 48.1 |
| TkA08G072480 | PF22785 | Tc-R-P | 85 | 173 | 3.8e-10 | 41.0 |
| TkA08G072480 | PF00782 | DSPc | 105 | 208 | 1.2e-17 | 64.6 |
| TkA08G072480 | PF22741 | PTP-NADK | 128 | 176 | 0.00018 | 21.7 |
| TkA08G072480 | PF14566 | PTPlike_phytase | 129 | 170 | 0.00065 | 20.6 |
| TkA08G072480 | PF00102 | Y_phosphatase | 148 | 201 | 0.0032 | 17.8 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.