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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkA07G444160
Reference: TK1151 Chr: Chr07 Coordinates: 112676595-112677639 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

321 bp · TkA07G444160|TK1151|cDNA

ATGATAAGAGCCGATGGATATAGATGGGAAGCGAGGGTTTTGGAAGCGATCAAATCCCTTCAATCTTTCCTCCCAAATCGGGGAGTTCAGGAGGGAAAATCTCACGCTATCAATCTAATCCGTTTTTCCCCTCCCTATAAACCCATCGAGCTGTATTCATCCCCTCACGAAATCAAAGAATTTTGCTGCTGTTTCTGTTATTTCTTCTCTGCTGCGGGATTTTTCATTGCTGGGGGATCAGTCGAGTTACAGGGAGGTTC...

321 bp · TkA07G444160|TK1151|CDS

ATGATAAGAGCCGATGGATATAGATGGGAAGCGAGGGTTTTGGAAGCGATCAAATCCCTTCAATCTTTCCTCCCAAATCGGGGAGTTCAGGAGGGAAAATCTCACGCTATCAATCTAATCCGTTTTTCCCCTCCCTATAAACCCATCGAGCTGTATTCATCCCCTCACGAAATCAAAGAATTTTGCTGCTGTTTCTGTTATTTCTTCTCTGCTGCGGGATTTTTCATTGCTGGGGGATCAGTCGAGTTACAGGGAGGTTC...

106 aa · TkA07G444160|TK1151|PROTEIN

MIRADGYRWEARVLEAIKSLQSFLPNRGVQEGKSHAINLIRFSPPYKPIELYSSPHEIKEFCCCFCYFFSAAGFFIAGGSVELQGGSISRHYRFDLDDTLLIRIKP

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA07G444160
TK1151 IDTkA07G444160
OH-1004 IDLXL04_006594
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)74.300
Protein coverage (%)TK1151 33.019 / OH-1004 10.574
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA07G444160
LocationChr07:112676595-112677639 (-)
DescriptionSimilar to ASHH1: Histone-lysine N-methyltransferase ASHH1
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_006594 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0000122 negative regulation of transcription by RNA polymerase II Biological Process
GO:0006281 DNA repair Biological Process
GO:0006302 double-strand break repair Biological Process
GO:0006351 DNA-templated transcription Biological Process
GO:0006355 regulation of DNA-templated transcription Biological Process
GO:0009553 embryo sac development Biological Process
GO:0009555 pollen development Biological Process
GO:0009908 flower development Biological Process
GO:0009910 negative regulation of flower development Biological Process
GO:0010223 secondary shoot formation Biological Process
GO:0010224 response to UV-B Biological Process
GO:0010228 vegetative to reproductive phase transition of meristem Biological Process
KEGG gene cross-reference
ath:AT1G76710
ath:AT1G77300
hsa:7468
mmu:107823
ncr:NCU00269
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.398
Rank 1 · TkA07G444160 · TK1151
Nucleus0.339
Rank 2 · TkA07G444160 · TK1151
Mitochondrion0.163
Rank 3 · TkA07G444160 · TK1151
Cell membrane0.104
Rank 4 · TkA07G444160 · TK1151
Plastid0.086
Rank 5 · TkA07G444160 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

No result was found for this query.

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