Gene Card
Gene overview
cDNA / CDS / Protein Sequences
480 bp · TkA07G427730|TK1151|cDNA
ATGGGGAAATACGAATGGTCAGGTTACCTTACTCTCGTAGAAATGATTCAGAAAGCAGGTCTTAAGCTTCATGTTTCCCTGTGCTTCCATGGCTGCAAACAAGAAAACATTCCCCTCCCCAGATGGGTTTCAGAACTTGGAAAATCTGAACCGGATATCTTCTTTGCTGACGCTCAGGGAAGGCGCTATAAAGACTGTCTATCTTTTGGTATTGACAATCTTCCTGTTTTTGATGGCAAAACCGCCATGAATGTTTACCA...
480 bp · TkA07G427730|TK1151|CDS
ATGGGGAAATACGAATGGTCAGGTTACCTTACTCTCGTAGAAATGATTCAGAAAGCAGGTCTTAAGCTTCATGTTTCCCTGTGCTTCCATGGCTGCAAACAAGAAAACATTCCCCTCCCCAGATGGGTTTCAGAACTTGGAAAATCTGAACCGGATATCTTCTTTGCTGACGCTCAGGGAAGGCGCTATAAAGACTGTCTATCTTTTGGTATTGACAATCTTCCTGTTTTTGATGGCAAAACCGCCATGAATGTTTACCA...
Protein
Download Protein FASTA159 aa · TkA07G427730|TK1151|PROTEIN
MGKYEWSGYLTLVEMIQKAGLKLHVSLCFHGCKQENIPLPRWVSELGKSEPDIFFADAQGRRYKDCLSFGIDNLPVFDGKTAMNVYQGFAESFKTSFSSFMDSTITGITIGMGADGELRYPSHQDQTRNKLGLGAGEFQCYDRNNMMTSKKPCRKSWKP
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA07G427730 |
|---|---|
| TK1151 ID | TkA07G427730 |
| OH-1004 ID | LXL04_028894 |
| Relationship / confidence | Non Reciprocal Best Hit / Complex relationship |
| Protein identity (%) | 89.300 |
| Protein coverage (%) | TK1151 94.340 / OH-1004 27.829Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA07G427730 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr07:108187473-108188033 (-) | |||||||||
| Description | Similar to BAM9: Inactive beta-amylase 9 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0000024 maltose biosynthetic process Biological Process GO:0005983 starch catabolic process Biological Process GO:0009409 response to cold Biological Process GO:0009414 response to water deprivation Biological Process GO:0005576 extracellular region Cellular Component GO:0005737 cytoplasm Cellular Component GO:0005829 cytosol Cellular Component GO:0009507 chloroplast Cellular Component GO:0009570 chloroplast stroma Cellular Component GO:0016161 beta-amylase activity Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT3G23920 ath:AT4G17090 ath:AT5G18670 ath:AT5G55700 dosa:Os03g0141200 osa:4331577 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF01373Glyco_hydro_143-144 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA07G427730 | PF01373 | Glyco_hydro_14 | 3 | 144 | 1.1e-37 | 130.7 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.