Gene Card
Gene overview
cDNA / CDS / Protein Sequences
846 bp · TkA07G425350|TK1151|cDNA
ATGGATTTCCTCAAAAATCACCACCGCCACCATAGCTCCGCCGCCAGTAACCGTTCAATCTCCGACACCGACTCCGAACTCCACGACTTCCACTCTCCTCTCCGCGCCGACTCGCCTCTTCGCTTCGACGAATTCTCCTCACCCACTTCCACAGCCATCGTCTCCGTTGACAAGTACCAAACTCCCTTCCGATCTCCGCTTTCCAACAGCGAAAAATCTTCTCACACCATCACTATCTCGCCGCTGGCAAAAGCTCAACC...
846 bp · TkA07G425350|TK1151|CDS
ATGGATTTCCTCAAAAATCACCACCGCCACCATAGCTCCGCCGCCAGTAACCGTTCAATCTCCGACACCGACTCCGAACTCCACGACTTCCACTCTCCTCTCCGCGCCGACTCGCCTCTTCGCTTCGACGAATTCTCCTCACCCACTTCCACAGCCATCGTCTCCGTTGACAAGTACCAAACTCCCTTCCGATCTCCGCTTTCCAACAGCGAAAAATCTTCTCACACCATCACTATCTCGCCGCTGGCAAAAGCTCAACC...
Protein
Download Protein FASTA281 aa · TkA07G425350|TK1151|PROTEIN
MDFLKNHHRHHSSAASNRSISDTDSELHDFHSPLRADSPLRFDEFSSPTSTAIVSVDKYQTPFRSPLSNSEKSSHTITISPLAKAQPPPAAASYNRSAKADALTGVDGGTNKTRAPVTPIARKSRREVTSERAALVCRVCEVILTLIAFSVMASDETQGWSGDSFDRYKEYRYLVALNAIAFTYAAFQFIDLTYQLIYQKHLLTYSLRWQFEFLIDQVLAYLLISSSSSAATRIDDWASNWGKDEFTKKASVSVVMSFLS...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA07G425350 |
|---|---|
| TK1151 ID | TkA07G425350 |
| OH-1004 ID | LXL04_030712 |
| Relationship / confidence | Rbh Sequence Supported / Probable |
| Protein identity (%) | 91.600 |
| Protein coverage (%) | TK1151 97.509 / OH-1004 93.333Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA07G425350 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr07:107531138-107532165 (+) | |||||||||
| Description | Similar to At2g36330: CASP-like protein 4A3 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0005634 nucleus Cellular Component GO:0005886 plasma membrane Cellular Component | |||||||||
| KEGG gene cross-reference | aly:9300896 ath:AT2G36330 ath:AT5G40300 ath:AT5G62820 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF06547DUF11175-26 aaPF06547DUF1117103-156 aaPF04535CASP_dom131-262 aaPF01284MARVEL135-268 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA07G425350 | PF06547 | DUF1117 | 5 | 26 | 0.21 | 12.8 |
| TkA07G425350 | PF06547 | DUF1117 | 103 | 156 | 0.21 | 12.8 |
| TkA07G425350 | PF04535 | CASP_dom | 131 | 262 | 2.5e-29 | 102.7 |
| TkA07G425350 | PF01284 | MARVEL | 135 | 268 | 1.7e-06 | 28.9 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.