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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA07G372790
Reference: TK1151 Chr: Chr07 Coordinates: 93516372-93519048 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

1800 bp · TkA07G372790|TK1151|cDNA

ATGGGTTGTGCTCCAACAAAGCCATTGATGGATACATCCCATCAGGGTCTCCACAAACTAAAAATGGAAAACGGGTACTTTAGAGGATCAAGAAAGTCGATTTCCGGCGGCCGGAATTTGAGCAGCTCCGGCGGTAGTAGCAGCAGTGGTAGCCGGAAGGAGAAGATGATGAATGGTAAAGATGGGAAGGAGGCTGGAACTGTTAGGAGCACAGGTAGTGGTGGTACTAGTAGTAGTGGTGGCGGCCGTGGTGGCAGTGA...

CDS

Download CDS FASTA

1800 bp · TkA07G372790|TK1151|CDS

ATGGGTTGTGCTCCAACAAAGCCATTGATGGATACATCCCATCAGGGTCTCCACAAACTAAAAATGGAAAACGGGTACTTTAGAGGATCAAGAAAGTCGATTTCCGGCGGCCGGAATTTGAGCAGCTCCGGCGGTAGTAGCAGCAGTGGTAGCCGGAAGGAGAAGATGATGAATGGTAAAGATGGGAAGGAGGCTGGAACTGTTAGGAGCACAGGTAGTGGTGGTACTAGTAGTAGTGGTGGCGGCCGTGGTGGCAGTGA...

Protein

Download Protein FASTA

599 aa · TkA07G372790|TK1151|PROTEIN

MGCAPTKPLMDTSHQGLHKLKMENGYFRGSRKSISGGRNLSSSGGSSSSGSRKEKMMNGKDGKEAGTVRSTGSGGTSSSGGGRGGSDGGGVVMRRSSVSPNVDNSDELVDGWPKWLTDNVPKGALDGLIPKSADAYDKLDKIGSGTYSNVYKARDRKTKKIVALKKVRFDTSEPESIKFMAREIMMLRKLDHPNIVKLEGLATSRMQYSLYLVFDYMQTDLSRIISREDRLTEPQVKSYMQQLLSGLQHCHERGILHRDI...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA07G372790
TK1151 IDTkA07G372790
OH-1004 IDLXL04_030044
Relationship / confidenceRbh High Identity Coverage Synteny / Strict
Protein identity (%)97.200
Protein coverage (%)TK1151 100.000 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA07G372790
LocationChr07:93516372-93519048 (+)
DescriptionSimilar to At1g54610: Probable serine/threonine-protein kinase At1g54610
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g54610 Probable serine/threonine-protein kinase At1g54610. No verified direct reference in this release
At1g09600 Probable serine/threonine-protein kinase At1g09600. No verified direct reference in this release
At5g39420 Cyclin-dependent kinase C-2 C. No verified direct reference in this release
At1g18670 Required for beta-aminobutyric acid (BABA)-induced resistance (BABA-IR) against bacteria (e.g. P.syringae) and oomycetes (e.g. H.parasitica) via priming for salicylate (SA)-dependent defense responses such as pathogenesis-related PR-1 gene expression and trailing necrosis.
Dissecting the beta-aminobutyric acid-induced priming phenomenon in Arabidopsis.2005 · DOI: 10.1105/tpc.104.029728
Descendants of primed Arabidopsis plants exhibit resistance to biotic stress.2012 · DOI: 10.1104/pp.111.191593
At5g10270 Cyclin-dependent kinase C-1. No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_030044 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0002229 defense response to oomycetes Biological Process
GO:0009615 response to virus Biological Process
GO:0032968 positive regulation of transcription elongation by RNA polymerase II Biological Process
GO:0042742 defense response to bacterium Biological Process
GO:1900426 positive regulation of defense response to bacterium Biological Process
GO:1902290 positive regulation of defense response to oomycetes Biological Process
GO:2000031 regulation of salicylic acid mediated signaling pathway Biological Process
GO:0000307 cyclin-dependent protein kinase holoenzyme complex Cellular Component
GO:0005634 nucleus Cellular Component
GO:0005886 plasma membrane Cellular Component
GO:0004693 cyclin-dependent protein serine/threonine kinase activity Molecular Function
GO:0005524 ATP binding Molecular Function
KEGG gene cross-reference
ath:AT1G09600
ath:AT1G18670
ath:AT1G54610
ath:AT5G10270
ath:AT5G39420
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.612
Rank 1 · TkA07G372790 · TK1151
Nucleus0.322
Rank 2 · TkA07G372790 · TK1151
Cell membrane0.219
Rank 3 · TkA07G372790 · TK1151
Golgi apparatus0.034
Rank 4 · TkA07G372790 · TK1151
Mitochondrion0.033
Rank 5 · TkA07G372790 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF03109ABC1134-168 aa
PF26324HopBF1_kinase135-277 aa
PF00069Pkinase136-417 aa
PF07714PK_Tyr_Ser-Thr140-348 aa
PF01636APH142-251 aa
PF12330Haspin_kinase143-292 aa
PF13095FTA2230-279 aa
PF14531Kinase-like241-280 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA07G372790PF03109ABC11341680.0001322.0
TkA07G372790PF26324HopBF1_kinase1352770.02914.7
TkA07G372790PF00069Pkinase1364174.3e-70236.8
TkA07G372790PF07714PK_Tyr_Ser-Thr1403481.1e-33117.4
TkA07G372790PF01636APH1422510.0116.3
TkA07G372790PF12330Haspin_kinase1432920.1212.1
TkA07G372790PF13095FTA22302790.1212.8
TkA07G372790PF14531Kinase-like2412800.1711.8
TkA07G372790PF17667Pkinase_fungal2453090.211.1
TkA07G372790PF03109ABC12462960.0001322.0
TkA07G372790PF07387Seadorna_VP72462780.009815.7
TkA07G372790PF01636APH2482850.0116.3
TkA07G372790PF19892DUF63654144840.01914.4
TkA07G372790PF17667Pkinase_fungal4444660.211.1
TkA07G372790PF26324HopBF1_kinase4854980.02914.7

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q9ZVM9Arabidopsis thalianasp|Q9ZVM9|Y1461_ARATH Probable serine/threonine-protein kinase At1g5461060.100%Swiss-ProtMedium
F4I114Arabidopsis thalianasp|F4I114|Y1960_ARATH Probable serine/threonine-protein kinase At1g0960054.000%Swiss-ProtMedium
B5X564Arabidopsis thalianasp|B5X564|CDC2C_ARATH Cyclin-dependent kinase C-2 C55.000%Swiss-ProtMedium
F4ICB6Arabidopsis thalianasp|F4ICB6|IBS1_ARATH Protein IMPAIRED IN BABA-INDUCED STERILITY 153.400%Swiss-ProtMedium
Q9LFT8Arabidopsis thalianasp|Q9LFT8|CDKC1_ARATH Cyclin-dependent kinase C-147.500%Swiss-ProtMedium

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