Gene Card
Gene overview
cDNA / CDS / Protein Sequences
369 bp · TkA07G272200|TK1151|cDNA
ATGTCAGGCCGTGGAAAGGGAGGCAAGGGGCTCGGAAAGGGAGGAGCCAAGCGACACAGGAAGGTTCTCCGTGACAACATCCAGGGAATAACCAAGCCCGCCATTCGCAGATTGGCTCGTCGTGGAGGTGTCAAGCGTATCAGCGGCTTGATCTACGAGGAAACTCGCGTGTATGAACGGGTTCGGTGGTTAGATTTAGGGTTTCTGGAAAACTTGTTTTTGTTTTACATCTTGAATCAATTTTACAGCTATTATGAAGA...
369 bp · TkA07G272200|TK1151|CDS
ATGTCAGGCCGTGGAAAGGGAGGCAAGGGGCTCGGAAAGGGAGGAGCCAAGCGACACAGGAAGGTTCTCCGTGACAACATCCAGGGAATAACCAAGCCCGCCATTCGCAGATTGGCTCGTCGTGGAGGTGTCAAGCGTATCAGCGGCTTGATCTACGAGGAAACTCGCGTGTATGAACGGGTTCGGTGGTTAGATTTAGGGTTTCTGGAAAACTTGTTTTTGTTTTACATCTTGAATCAATTTTACAGCTATTATGAAGA...
Protein
Download Protein FASTA122 aa · TkA07G272200|TK1151|PROTEIN
MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRVYERVRWLDLGFLENLFLFYILNQFYSYYEDKIHSFFSWSDKSGCILFIIFQHRRRIIVGFEWFTC
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA07G272200 |
|---|---|
| TK1151 ID | TkA07G272200 |
| OH-1004 ID | LXL04_029101 |
| Relationship / confidence | Rbh High Identity Coverage Synteny / Strict |
| Protein identity (%) | 99.200 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA07G272200 |
|---|---|
| Location | Chr07:68059686-68060218 (-) |
| Description | Similar to Histone H4 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0006325 chromatin organization Biological Process GO:0006334 nucleosome assembly Biological Process GO:0006355 regulation of DNA-templated transcription Biological Process GO:0042790 nucleolar large rRNA transcription by RNA polymerase I Biological Process GO:0045943 positive regulation of transcription by RNA polymerase I Biological Process GO:0000786 nucleosome Cellular Component GO:0005634 nucleus Cellular Component GO:0062040 fungal biofilm matrix Cellular Component GO:0003677 DNA binding Molecular Function GO:0030527 structural constituent of chromatin Molecular Function GO:0042802 identical protein binding Molecular Function GO:0046982 protein heterodimerization activity Molecular Function |
| KEGG gene cross-reference | cgr:2886845 cgr:2888694 cgr:2891686 sce:YBR009C sce:YNL030W uma:UMAG_02710 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.