How to use this page

Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkA07G221970
Reference: TK1151 Chr: Chr07 Coordinates: 55642901-55644072 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

408 bp · TkA07G221970|TK1151|cDNA

ATGGTCTTAAAAAGGAGGGTTGTTGATCCTAATGAGTTGCTTAAGACAGCAATTGCTAAAGCTGGATACTCCGAAAAGATTGTCATTGGAATGGATGTTGCTGCATCTGAGTTTTATGCCGAGAAGGGAAAGACCTACGATCTGAACTTCAAGGAAGTATTGATTCGTTATGTTGGTCTACTGATTCAGTTCTTAATTAGACCAGTTATTCATACACGCACGTCAGGTATGACATCTCGTAAACGCTCAAACGATGATGA...

408 bp · TkA07G221970|TK1151|CDS

ATGGTCTTAAAAAGGAGGGTTGTTGATCCTAATGAGTTGCTTAAGACAGCAATTGCTAAAGCTGGATACTCCGAAAAGATTGTCATTGGAATGGATGTTGCTGCATCTGAGTTTTATGCCGAGAAGGGAAAGACCTACGATCTGAACTTCAAGGAAGTATTGATTCGTTATGTTGGTCTACTGATTCAGTTCTTAATTAGACCAGTTATTCATACACGCACGTCAGGTATGACATCTCGTAAACGCTCAAACGATGATGA...

135 aa · TkA07G221970|TK1151|PROTEIN

MVLKRRVVDPNELLKTAIAKAGYSEKIVIGMDVAASEFYAEKGKTYDLNFKEVLIRYVGLLIQFLIRPVIHTRTSGMTSRKRSNDDDDDFVYGDKGFCAIFESMILGSKLHISVIDLWETLLNHEEQRRNKNSTS

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

Download Gene (CDS) Download Protein

ID Mapping

Input IDTkA07G221970
TK1151 IDTkA07G221970
OH-1004 IDLXL04_013674
Relationship / confidenceSequence Supported Annotation Or Model Conflict / Review
Protein identity (%)97.000
Protein coverage (%)TK1151 99.259 / OH-1004 24.453
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA07G221970
LocationChr07:55642901-55644072 (+)
DescriptionSimilar to CAR5: Protein C2-DOMAIN ABA-RELATED 5
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At2g36530 Multifunctional enzyme that acts as an enolase involved in the metabolism and as a positive regulator of cold-responsive gene transcription.

Rice

Reference gene IDPossible functionPapers / DOI
Os10g0167300 Enolase. No verified direct reference in this release
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_013674 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006952 defense response Biological Process
GO:0009651 response to salt stress Biological Process
GO:0009737 response to abscisic acid Biological Process
GO:0009738 abscisic acid-activated signaling pathway Biological Process
GO:0009789 positive regulation of abscisic acid-activated signaling pathway Biological Process
GO:0043547 positive regulation of GTPase activity Biological Process
GO:1900426 positive regulation of defense response to bacterium Biological Process
GO:1901002 positive regulation of response to salt stress Biological Process
GO:0005634 nucleus Cellular Component
GO:0005829 cytosol Cellular Component
GO:0005886 plasma membrane Cellular Component
GO:0009507 chloroplast Cellular Component
KEGG gene cross-reference
ath:AT1G48590
ath:AT3G17980
ath:AT5G37740
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Nucleus0.381
Rank 1 · TkA07G221970 · TK1151
Cytoplasm0.347
Rank 2 · TkA07G221970 · TK1151
Mitochondrion0.181
Rank 3 · TkA07G221970 · TK1151
Cell membrane0.092
Rank 4 · TkA07G221970 · TK1151
Endoplasmic reticulum0.066
Rank 5 · TkA07G221970 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF00113Enolase_C12-52 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA07G221970PF00113Enolase_C12525.5e-1246.3

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
P25696Arabidopsis thalianasp|P25696|ENO2_ARATH Bifunctional enolase 2/transcriptional activator82.900%Swiss-ProtLow
Q42971Oryza sativa subsp. japonicasp|Q42971|ENO_ORYSJ Enolase82.900%Swiss-ProtLow

JBrowse

View in Genome Browser