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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA07G108350
Reference: TK1151 Chr: Chr07 Coordinates: 28078893-28079333 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

441 bp · TkA07G108350|TK1151|cDNA

ATGGCCGACGAAGCCAAGGCCAAAGGTAACGCCGCGTTCTCTGTCGGAAACTACACCGAACCTATCCGTCACTTCACTGACGCCATTAACCTCGCCCCTACCAACCACGTTCTTTACTCCAACCGATCTGCCGCTTACACTTCCCTGAATCAATATTCCGAAGCCCTAACAGATGCTCAAAAGACTGTCGATTCACGTAGCTCAATTCCACACGAGCATTACATGAAAATGGCTAAATTTGAACCGATGAATCAATCCAA...

CDS

Download CDS FASTA

441 bp · TkA07G108350|TK1151|CDS

ATGGCCGACGAAGCCAAGGCCAAAGGTAACGCCGCGTTCTCTGTCGGAAACTACACCGAACCTATCCGTCACTTCACTGACGCCATTAACCTCGCCCCTACCAACCACGTTCTTTACTCCAACCGATCTGCCGCTTACACTTCCCTGAATCAATATTCCGAAGCCCTAACAGATGCTCAAAAGACTGTCGATTCACGTAGCTCAATTCCACACGAGCATTACATGAAAATGGCTAAATTTGAACCGATGAATCAATCCAA...

Protein

Download Protein FASTA

146 aa · TkA07G108350|TK1151|PROTEIN

MADEAKAKGNAAFSVGNYTEPIRHFTDAINLAPTNHVLYSNRSAAYTSLNQYSEALTDAQKTVDSRSSIPHEHYMKMAKFEPMNQSKKTPISSCEQSRSAFIDLIILIAVISACGECYKSSNSSSLKNGLKTGLFEAERLPPGIRG

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA07G108350
TK1151 IDTkA07G108350
OH-1004 IDLXL04_027947
Relationship / confidenceRbh High Identity Coverage Synteny / Strict
Protein identity (%)99.300
Protein coverage (%)TK1151 100.000 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA07G108350
LocationChr07:28078893-28079333 (+)
DescriptionSimilar to HOP1: Hsp70-Hsp90 organizing protein 1
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g62740 Mediates the association of the molecular chaperones HSP70 and HSP90. No verified direct reference in this release
At4g12400 Mediates the association of the molecular chaperones HSP70 and HSP90. No verified direct reference in this release
At1g12270 Mediates the association of the molecular chaperones HSP70 and HSP90. No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_027947 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006986 response to unfolded protein Biological Process
GO:0009408 response to heat Biological Process
GO:0009611 response to wounding Biological Process
GO:0010286 heat acclimation Biological Process
GO:0034605 cellular response to heat Biological Process
GO:0046686 response to cadmium ion Biological Process
GO:0051131 chaperone-mediated protein complex assembly Biological Process
GO:0070417 cellular response to cold Biological Process
GO:0005634 nucleus Cellular Component
GO:0005737 cytoplasm Cellular Component
GO:0005829 cytosol Cellular Component
GO:0051879 Hsp90 protein binding Molecular Function
KEGG gene cross-reference
ath:AT1G62740
ath:AT4G12400
gmx:547932
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.420
Rank 1 · TkA07G108350 · TK1151
Nucleus0.270
Rank 2 · TkA07G108350 · TK1151
Mitochondrion0.221
Rank 3 · TkA07G108350 · TK1151
Peroxisome0.093
Rank 4 · TkA07G108350 · TK1151
Plastid0.086
Rank 5 · TkA07G108350 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF25575TPR_BSK1_C4-76 aa
PF07719TPR_27-35 aa
PF00515TPR_18-35 aa
PF13181TPR_88-35 aa
PF13424TPR_128-64 aa
PF13374TPR_109-29 aa
PF13414TPR_119-46 aa
PF13431TPR_1725-56 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA07G108350PF25575TPR_BSK1_C4767.5e-0626.5
TkA07G108350PF07719TPR_27352.3e-0524.9
TkA07G108350PF00515TPR_18355.1e-0523.6
TkA07G108350PF13181TPR_88350.06314.2
TkA07G108350PF13424TPR_128640.1612.9
TkA07G108350PF13374TPR_109290.00218.8
TkA07G108350PF13414TPR_119460.00417.5
TkA07G108350PF13431TPR_1725560.001719.2
TkA07G108350PF07719TPR_238612.3e-0524.9
TkA07G108350PF00515TPR_139615.1e-0523.6
TkA07G108350PF13374TPR_1039660.00218.8
TkA07G108350PF13181TPR_839610.06314.2
TkA07G108350PF13414TPR_1145570.00417.5
TkA07G108350PF28125At5g19025_N1021150.1413.7

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q5XEP2Arabidopsis thalianasp|Q5XEP2|HSOP2_ARATH Hsp70-Hsp90 organizing protein 273.400%Swiss-ProtLow
Q9STH1Arabidopsis thalianasp|Q9STH1|HSOP3_ARATH Hsp70-Hsp90 organizing protein 370.000%Swiss-ProtLow
Q9LNB6Arabidopsis thalianasp|Q9LNB6|HSOP1_ARATH Hsp70-Hsp90 organizing protein 173.300%Swiss-ProtLow

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