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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA07G095660
Reference: TK1151 Chr: Chr07 Coordinates: 24943965-24945463 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

886 bp · TkA07G095660|TK1151|cDNA

TATGGCATCGTTGGTCGCTTTTCAGGAAAAGTTAGTTTACGCCCCCGTCGGCCTGGTCTCACCAAGTCATATCCAACCACCCCCGAGCGTCTCCGCCTCATTTTCGAAGATGTATGGCTTACTTCTGCCGATGGCGTCCGCCTTCACTCATGGTTCATCAGGTTCTCTCCCAATTCCACAGGCCCAACTATTCTGTTCTTACAAGAAAACGCTGGAAATATTGCCCATCGTCTTGAAATGGTGCGCATTATGTTAGAAAA...

CDS

Download CDS FASTA

864 bp · TkA07G095660|TK1151|CDS

TATGGCATCGTTGGTCGCTTTTCAGGAAAAGTTAGTTTACGCCCCCGTCGGCCTGGTCTCACCAAGTCATATCCAACCACCCCCGAGCGTCTCCGCCTCATTTTCGAAGATGTATGGCTTACTTCTGCCGATGGCGTCCGCCTTCACTCATGGTTCATCAGGTTCTCTCCCAATTCCACAGGCCCAACTATTCTGTTCTTACAAGAAAACGCTGGAAATATTGCCCATCGTCTTGAAATGGTGCGCATTATGTTAGAAAA...

Protein

Download Protein FASTA

287 aa · TkA07G095660|TK1151|PROTEIN

YGIVGRFSGKVSLRPRRPGLTKSYPTTPERLRLIFEDVWLTSADGVRLHSWFIRFSPNSTGPTILFLQENAGNIAHRLEMVRIMLEKLHCNIFMLSYRGYGASDGYPSQNGITMDAQTALDHLAQRTDIDTTQIVVFGRSLGGAVGAVVTKNNPDKVAGLILENTFTSILDMAGVLLPFLKYFIGGNPKKILNFVVRSPWNTIDVIGQIKQPILFLSEKRDEIVPPFHMEMLYAKAAVNNKRCMFMEFPNGMHMDTWLTG...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA07G095660
TK1151 IDTkA07G095660
OH-1004 IDLXL04_027809
Relationship / confidenceRbh High Identity Coverage Synteny / Strict
Protein identity (%)96.400
Protein coverage (%)TK1151 97.909 / OH-1004 92.131
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA07G095660
LocationChr07:24943965-24945463 (+)
DescriptionSimilar to WAV2: Alpha/beta hydrolase domain-containing protein WAV2
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g20520 Involved in the regulation of root growth.
The Arabidopsis WAVY GROWTH 2 protein modulates root bending in response to environmental stimuli.2005 · DOI: 10.1105/tpc.104.028530

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_027809 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0002084 protein depalmitoylation Biological Process
GO:0006508 proteolysis Biological Process
GO:0048364 root development Biological Process
GO:0005737 cytoplasm Cellular Component
GO:0005783 endoplasmic reticulum Cellular Component
GO:0005886 plasma membrane Cellular Component
GO:0019866 organelle inner membrane Cellular Component
GO:0008236 serine-type peptidase activity Molecular Function
GO:0008474 palmitoyl-(protein) hydrolase activity Molecular Function
KEGG gene cross-reference
ath:AT5G20520
dre:561333
mmu:68904
spo:2540264
xla:432053
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Endoplasmic reticulum0.320
Rank 1 · TkA07G095660 · TK1151
Cytoplasm0.245
Rank 2 · TkA07G095660 · TK1151
Mitochondrion0.170
Rank 3 · TkA07G095660 · TK1151
Golgi apparatus0.130
Rank 4 · TkA07G095660 · TK1151
Cell membrane0.126
Rank 5 · TkA07G095660 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF05677DUF81874-151 aa
PF06342DUF105778-164 aa
PF07859Abhydrolase_380-155 aa
PF00561Abhydrolase_185-181 aa
PF12146Hydrolase_487-170 aa
PF12697Abhydrolase_689-168 aa
PF01764Lipase_3101-150 aa
PF20434BD-FAE105-154 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA07G095660PF05677DUF818741510.01914.7
TkA07G095660PF06342DUF1057781640.02814.2
TkA07G095660PF07859Abhydrolase_3801550.01715.6
TkA07G095660PF00561Abhydrolase_1851817.1e-1349.5
TkA07G095660PF12146Hydrolase_4871703.5e-1246.9
TkA07G095660PF12697Abhydrolase_6891680.001120.4
TkA07G095660PF01764Lipase_31011500.1712.5
TkA07G095660PF20434BD-FAE1051540.03814.2
TkA07G095660PF01738DLH1112530.002318.3
TkA07G095660PF05448AXE11121540.1711.3
TkA07G095660PF00326Peptidase_S91152541.4e-1041.7
TkA07G095660PF20408Abhydrolase_111181610.05314.0
TkA07G095660PF02230Abhydrolase_21251650.01116.2
TkA07G095660PF12740PETase1261550.004417.2
TkA07G095660PF12695Abhydrolase_51301630.2911.6
TkA07G095660PF12740PETase1942540.004417.2

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q8RXP6Arabidopsis thalianasp|Q8RXP6|WAV2_ARATH Alpha/beta hydrolase domain-containing protein WAV271.600%Swiss-ProtHigh

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