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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA07G091040
Reference: TK1151 Chr: Chr07 Coordinates: 23705078-23719098 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

579 bp · TkA07G091040|TK1151|cDNA

ATCGATGTTTTTTATGATTTTTAACAAAACGACACATCTTCACACTTCTATAAACACCTCCTCATTCGCTAACTTACTCACTTCCATCTGTGTGTTGTTTCAACATTTCTCATACTCAACCCTCTCTAGTGCCCTCAACATATTAACAGAATTTAAAGATGTGGAAGCTGAGAATAGGTGAAAAGAATGGAAAGTTCAACATCGGTGATGGAAACGGTGATGACTATTTGCATAGCACCAACAACTTTGTGGGGAGACAA...

CDS

Download CDS FASTA

2313 bp · TkA07G091040|TK1151|CDS

ATGTGGAAGCTGAGAATAGGTGAAAAGAATGGAAAGTTCAACATCGGTGATGGAAACGGTGATGACTATTTGCATAGCACCAACAACTTTGTGGGGAGACAAACATGGGAGTTCGACCCTGATGCAGGCACGCAGGAAGAGCGTGACGAAATTGAAAGGCTTCGAGAGCAATTTTTGATCAATAAAAAGAAGCTTGACATTAGATGTTGCGCAGACTTGCTCATGCGAAATCAGCTTATTAAGGAAAGCAGAATTGATCT...

Protein

Download Protein FASTA

770 aa · TkA07G091040|TK1151|PROTEIN

MWKLRIGEKNGKFNIGDGNGDDYLHSTNNFVGRQTWEFDPDAGTQEERDEIERLREQFLINKKKLDIRCCADLLMRNQLIKESRIDLISVPPVRLGDDEDVNYEVVTTAVRRAVRLNRAIQAWDGHWPAENAGPLFFTPPLIIALYISGTLDTILTQEHKREMIRYMYIHQNEDGGWGFYISGRSTMIGTALNYVGLRLLGEDDNDAINKGRKWILDHGGATSIPSWGKVYLSVLGVYEWAGCNPLPPEFWLFPSFLPYH...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA07G091040
TK1151 IDTkA07G091040
OH-1004 IDLXL04_027757
Relationship / confidenceMulti Source To Oh1004 / Complex relationship
Protein identity (%)97.400
Protein coverage (%)TK1151 100.000 / OH-1004 99.481
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA07G091040
LocationChr07:23705078-23719098 (+)
DescriptionSimilar to DDS: Dammarenediol II synthase
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g78960 Multifunctional enzyme that converts oxidosqualene to nine different triterpenes, mainly lupeol, beta-amyrin and alpha-amyrin in a 15:50:30 ratio.
Molecular cloning and expression in yeast of 2,3-oxidosqualene-triterpenoid cyclases from Arabidopsis thaliana.2001 · DOI: 10.1023/a:1006476123930

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_027757 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0002238 response to molecule of fungal origin Biological Process
GO:0009723 response to ethylene Biological Process
GO:0009753 response to jasmonic acid Biological Process
GO:0010038 response to metal ion Biological Process
GO:0016104 triterpenoid biosynthetic process Biological Process
GO:0016135 saponin biosynthetic process Biological Process
GO:0019745 pentacyclic triterpenoid biosynthetic process Biological Process
GO:0042542 response to hydrogen peroxide Biological Process
GO:0071731 response to nitric oxide Biological Process
GO:1902438 response to vanadate(3-) Biological Process
GO:0005789 endoplasmic reticulum membrane Cellular Component
GO:0005811 lipid droplet Cellular Component
KEGG gene cross-reference
ag:BAA33461
ag:BAB83088
ag:BAF33291
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Mitochondrion0.344
Rank 1 · TkA07G091040 · TK1151
Endoplasmic reticulum0.206
Rank 2 · TkA07G091040 · TK1151
Cytoplasm0.165
Rank 3 · TkA07G091040 · TK1151
Peroxisome0.118
Rank 4 · TkA07G091040 · TK1151
Cell membrane0.084
Rank 5 · TkA07G091040 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF13249SQHop_cyclase_N111-370 aa
PF00432Prenyltrans148-210 aa
PF13243SQHop_cyclase_C149-218 aa
PF13243SQHop_cyclase_C422-761 aa
PF00432Prenyltrans515-667 aa
PF13249SQHop_cyclase_N577-620 aa
PF09492Pec_lyase579-620 aa
PF00432Prenyltrans627-730 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA07G091040PF13249SQHop_cyclase_N1113704.2e-39135.2
TkA07G091040PF00432Prenyltrans1482107e-0729.7
TkA07G091040PF13243SQHop_cyclase_C1492183.1e-57194.7
TkA07G091040PF13243SQHop_cyclase_C4227613.1e-57194.7
TkA07G091040PF00432Prenyltrans5156677e-0729.7
TkA07G091040PF13249SQHop_cyclase_N5776204.2e-39135.2
TkA07G091040PF09492Pec_lyase5796200.001818.4
TkA07G091040PF00432Prenyltrans6277307e-0729.7
TkA07G091040PF09492Pec_lyase6446690.001818.4
TkA07G091040PF13249SQHop_cyclase_N6456694.2e-39135.2
TkA07G091040PF13249SQHop_cyclase_N7047284.2e-39135.2
TkA07G091040PF09492Pec_lyase7107290.001818.4

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q8RWT0Arabidopsis thalianasp|Q8RWT0|LUP2_ARATH Amyrin synthase LUP253.800%Swiss-ProtHigh

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