Gene Card
Gene overview
cDNA / CDS / Protein Sequences
747 bp · TkA07G018580|TK1151|cDNA
AGAAAGCCCACCAACACCCCTGTATTATTATCGATCATCAACGCCCCCAAACCAGGAATCTCGAAATCAAAGGAATAGCACAGCAATCGCACAAAAAGAAAAGTTTCTGGATTTATGCATGTTTGGGTGTTTGGATACAAATACCAAATTCCAAACACTCTGAACCTCTTAGTGGAACGACTTAATCATTAATAGGTAACCCAAACAACAAAATCCCATATGGGTTCTCGAGGAACAAATATTTTGCTATCAAGAGCAAG...
309 bp · TkA07G018580|TK1151|CDS
ATGGGTTCTCGAGGAACAAATATTTTGCTATCAAGAGCAAGTAGGATAAAATCAAAGCTTCAATCGGTGCTCGAAGCCAGGATTTTGGAAGTGGAAGATGTTTCATATCAGCATGCGGGCCATGCTGCAGTTAAAGACAATGCAAATGAAACACATTTTAATGTGAAAGTTGTTTCGGGTAAATTTGATGGGCAGAATCTTGTGAAGCGCCACCGTATGGTTTATGATGCACTCTCGGATGAGCTTGAATCGGGATTGCA...
Protein
Download Protein FASTA102 aa · TkA07G018580|TK1151|PROTEIN
MGSRGTNILLSRASRIKSKLQSVLEARILEVEDVSYQHAGHAAVKDNANETHFNVKVVSGKFDGQNLVKRHRMVYDALSDELESGLHAISIVAKTPKEAGLD
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA07G018580 |
|---|---|
| TK1151 ID | TkA07G018580 |
| OH-1004 ID | LXL04_026929 |
| Relationship / confidence | Rbh Below Probable Coverage Or Synteny Threshold / Review |
| Protein identity (%) | 100.000 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 68.456Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA07G018580 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr07:4997259-4998289 (-) | |||||||||
| Description | Similar to SUFE1: SufE-like protein 1, chloroplastic/mitochondrial | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0009793 embryo development ending in seed dormancy Biological Process GO:0016226 iron-sulfur cluster assembly Biological Process GO:0051301 cell division Biological Process GO:0005634 nucleus Cellular Component GO:0005739 mitochondrion Cellular Component GO:0005759 mitochondrial matrix Cellular Component GO:0005829 cytosol Cellular Component GO:0009507 chloroplast Cellular Component GO:0009570 chloroplast stroma Cellular Component GO:1990229 iron-sulfur cluster assembly complex Cellular Component GO:0008047 enzyme activator activity Molecular Function GO:0046872 metal ion binding Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT1G55805 ath:AT4G26500 bta:509530 mmu:69168 spo:2539858 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF01722BolA20-98 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA07G018580 | PF01722 | BolA | 20 | 98 | 8e-30 | 103.7 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.