TkA07G013890 | RubberDandelionOmics

Gene overview

TkA07G013890

Reference: TK1151 Chr: Chr07 Coordinates: 3782758-3783961 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

1050 bp · TkA07G013890|TK1151|cDNA

TTGTCACCCCCAAAAACCTCCCAATTCTCACCCCTCTTCTCTCTTCTTCCCCATCTTCCAACATCCACCCCCTCGTCTTCCCCTTCCCACCCCACCCTTCCTTCCCGCCGGCGTAGAAAACGTCAAAGACATCGGAAACCATGGAAACCTCCCGATTATCATCTCACTCGCGAAACTCCAAGACCCGATTGTCAATTGGTTCAACTCACACCCCAATCCACCCGTCGCGATCCTCTCCGATTTCTTCCTCGGGTGGACCC...

CDS

Download CDS FASTA

1050 bp · TkA07G013890|TK1151|CDS

TTGTCACCCCCAAAAACCTCCCAATTCTCACCCCTCTTCTCTCTTCTTCCCCATCTTCCAACATCCACCCCCTCGTCTTCCCCTTCCCACCCCACCCTTCCTTCCCGCCGGCGTAGAAAACGTCAAAGACATCGGAAACCATGGAAACCTCCCGATTATCATCTCACTCGCGAAACTCCAAGACCCGATTGTCAATTGGTTCAACTCACACCCCAATCCACCCGTCGCGATCCTCTCCGATTTCTTCCTCGGGTGGACCC...

Protein

Download Protein FASTA

349 aa · TkA07G013890|TK1151|PROTEIN

LSPPKTSQFSPLFSLLPHLPTSTPSSSPSHPTLPSRRRRKRQRHRKPWKPPDYHLTRETPRPDCQLVQLTPQSTRRDPLRFLPRVDPHLADKLRIPRIAFFSSGAFLTSTLDYICNNMSLVRSQEVTVFHDLPHSPSFSWEHLPSIARYYKESDPEWKLVLDSFVLNASSWGGVFGVGPVSLLPGSDPTTRGQSGNSDVLKWLDGNSDGSVVYVCFGSQKFLTGDQMEALTMGLEASGVHYVLVVKPEQDGPIRTGSGRG...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

ID Mapping

Input ID	`TkA07G013890`
TK1151 ID	TkA07G013890
OH-1004 ID	LXL04_030557
Relationship / confidence	Non Reciprocal Best Hit / Complex relationship
Protein identity (%)	33.800
Protein coverage (%)	TK1151 73.639 / OH-1004 33.091 Coverage and evidence Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.
Source version	TK1151 / GWHBCHF00000000

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SNP / Indel variants and carrier samplesCRA009020 · TK1151

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Basic Information and Functional Annotation

Gene ID TkA07G013890

Location Chr07:3782758-3783961 (+)

Description Similar to UGT89B1: Flavonol 3-O-glucosyltransferase UGT89B1

Arabidopsis / Rice Reference Genes and Papers

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Arabidopsis

Reference gene ID	Possible function	Papers / DOI
`At5g03490`	Glucosyltransferase that glucosylates benzoates and benzoate derivatives in vitro.	No verified direct reference in this release
`At1g73880`	Possesses quercetin 3-O-glucosyltransferase, 7-O-glucosyltransferase and 4'-O-glucosyltransferase activities in vitro.	No verified direct reference in this release
`At2g15490`	Possesses quercetin 3-O-glucosyltransferase and low 7-O-glucosyltransferase activities in vitro.	No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source

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Functional annotation source: OH1004 · LXL04_030557 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)

GO:1901734 quercetin biosynthetic process Biological Process

GO:0005634 nucleus Cellular Component

GO:0008194 UDP-glycosyltransferase activity Molecular Function

GO:0033836 flavonol 7-O-beta-glucosyltransferase activity Molecular Function

GO:0035251 UDP-glucosyltransferase activity Molecular Function

GO:0047893 flavonol 3-O-glucosyltransferase activity Molecular Function

GO:0080043 quercetin 3-O-glucosyltransferase activity Molecular Function

GO:0080044 quercetin 7-O-glucosyltransferase activity Molecular Function

GO:0080046 quercetin 4'-O-glucosyltransferase activity Molecular Function

KEGG gene cross-reference

ath:AT1G73880

ath:AT5G03490

These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

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Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

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Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.668

Rank 1 · TkA07G013890 · TK1151

Nucleus0.370

Rank 2 · TkA07G013890 · TK1151

Endoplasmic reticulum0.091

Rank 3 · TkA07G013890 · TK1151

Cell membrane0.053

Rank 4 · TkA07G013890 · TK1151

Mitochondrion0.046

Rank 5 · TkA07G013890 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

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Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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Protein	Organism	Description	Identity	Database	Confidence
`Q9LZD8`	Arabidopsis thaliana	sp\|Q9LZD8\|U89A2_ARATH UDP-glycosyltransferase 89A2	39.900%	Swiss-Prot	Medium
`Q9C9B0`	Arabidopsis thaliana	sp\|Q9C9B0\|U89B1_ARATH Flavonol 3-O-glucosyltransferase UGT89B1	34.700%	Swiss-Prot	Medium
`Q7Y232`	Arabidopsis thaliana	sp\|Q7Y232\|U73B4_ARATH UDP-glycosyltransferase 73B4	30.000%	Swiss-Prot	Low

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