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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkA06G406350
Reference: TK1151 Chr: Chr06 Coordinates: 100686440-100691066 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

1376 bp · TkA06G406350|TK1151|cDNA

AGTCTATCCAATTCTTTCATACAGATACCGCGAGTCTTAACAACTACTCCCTTCGTCCCAAAGGCTTCGTCTTCTTCGCCTGTACTGCAACCCCTCTTCTCCAACAACAACAATGGCCGCATTTCGTCTCTCCATGCCTCCACCTCCTACTTCTCATTGCCATCGTCCGTTGGGAAGTTTTTCAAGAAAAAGAAGTTCGCCGCCACCATCACAGCCATGGCACAACCACAGAGAAGCGCGATGCAGTATAATCAAGTTGG...

1284 bp · TkA06G406350|TK1151|CDS

ATGGCTTCGTCTTCTTCGCCTGTACTGCAACCCCTCTTCTCCAACAACAACAATGGCCGCATTTCGTCTCTCCATGCCTCCACCTCCTACTTCTCATTGCCATCGTCCGTTGGGAAGTTTTTCAAGAAAAAGAAGTTCGCCGCCACCATCACAGCCATGGCACAACCACAGAGAAGCGCGATGCAGTATAATCAAGTTGGGGATTCCAACCTGATAGTCAGTGAAATTACTTTCGGCACCATGACATTTGGAGAACAGAA...

427 aa · TkA06G406350|TK1151|PROTEIN

MASSSSPVLQPLFSNNNNGRISSLHASTSYFSLPSSVGKFFKKKKFAATITAMAQPQRSAMQYNQVGDSNLIVSEITFGTMTFGEQNTEKEAHEMLSYACEHGINTLDTAEMYPIPMKKETQGLTDIYIGNWLKSRPRDQIILATKVSGYSDRLSYIRDNAEVLRVDAANIKESVEKSLKRLNTDYIDLLQIHWPDRYVGLFGEFFYDPSKWRQSVPNLSMKERNKIRTNSNLPEFFIIDDHKVRYIGVSNETSYGVMEF...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA06G406350
TK1151 IDTkA06G406350
OH-1004 IDLXL04_023075
Relationship / confidenceMulti Source To Oh1004 / Complex relationship
Protein identity (%)86.100
Protein coverage (%)TK1151 99.532 / OH-1004 99.518
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA06G406350
LocationChr06:100686440-100691066 (+)
DescriptionSimilar to tas: Protein tas
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_023075 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0034198 cellular response to amino acid starvation Biological Process
GO:1901379 regulation of potassium ion transmembrane transport Biological Process
GO:0005737 cytoplasm Cellular Component
GO:0005829 cytosol Cellular Component
GO:0008076 voltage-gated potassium channel complex Cellular Component
GO:0005249 voltage-gated potassium channel activity Molecular Function
GO:0008106 alcohol dehydrogenase (NADP+) activity Molecular Function
GO:0015459 potassium channel regulator activity Molecular Function
GO:0016491 oxidoreductase activity Molecular Function
GO:0044325 transmembrane transporter binding Molecular Function
KEGG gene cross-reference
bsu:BSU26850
ecj:JW2802
eco:b2834
ecoc:C3026_15565
sfl:SF2844
sfx:S3042
xla:373751
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Plastid0.961
Rank 1 · TkA06G406350 · TK1151
Mitochondrion0.051
Rank 2 · TkA06G406350 · TK1151
Cytoplasm0.037
Rank 3 · TkA06G406350 · TK1151
Peroxisome0.032
Rank 4 · TkA06G406350 · TK1151
Nucleus0.024
Rank 5 · TkA06G406350 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF00248Aldo_ket_red75-417 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA06G406350PF00248Aldo_ket_red754177.2e-56190.1

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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