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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA06G221120
Reference: TK1151 Chr: Chr06 Coordinates: 57049376-57052359 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

1866 bp · TkA06G221120|TK1151|cDNA

AAGTCAACTAATTTAATGGGAATGAGGTGCCAGGCACACTTTTACTTTTTTGCAAGTGTCCCACTGCTTCTCCCCCCTCTTTTATCTTCAAAACTCTGGCGATTCGTTGCCTATTGGAGACCTGATTCCTCTTTTCTTGTATAAATTCTCTCAAATTAAGTTGCGTTTCAATTAAAAATCACATATTCCATCGCGTTTTTGTCGAATTTTTTCTAGATATGGAAGATGAATATGCAAAACTTATCAGGCGGATGAATCCA...

CDS

Download CDS FASTA

1116 bp · TkA06G221120|TK1151|CDS

ATGGACGTTTTCAACGTTATTTACCGTGACGGAAGCAAAATCAAAGATGAAGGCGTTATCGACTACATAAAAAAGGTGCTTGAAAGCGACGCATTTTACATACCACCAAGTGGTTCAGTCGGACTAAAATCTTCACAAGATTACACCGCCATTGAACTAGCTGGAATAGACAGACCTGGACTATTATCCGAAGTATCTGCAGTTCTCACAAGTCTCGGATGTAATGTAGTCAATGCTGAAATATGGACCCACAATGCCAG...

Protein

Download Protein FASTA

371 aa · TkA06G221120|TK1151|PROTEIN

MDVFNVIYRDGSKIKDEGVIDYIKKVLESDAFYIPPSGSVGLKSSQDYTAIELAGIDRPGLLSEVSAVLTSLGCNVVNAEIWTHNARAAAVVHVTDEKTRCAVEDPKRLSTIKKLLCNVLKGNDNDFKTGKMTLSPPGFTHRERRLHQIMFAERDYENVGRAEREEKENRSRPHVTVLDCAERDYTVVTMRCRDRPKLLFDIICTLTDMQYVVFHGVVHTGKMEAIQEYYIRHIDGSPVSSEAERERVMQCLEAAIERRT...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA06G221120
TK1151 IDTkA06G221120
OH-1004 IDLXL04_023774
Relationship / confidenceRbh Below Probable Coverage Or Synteny Threshold / Review
Protein identity (%)89.400
Protein coverage (%)TK1151 99.461 / OH-1004 83.745
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA06G221120
LocationChr06:57049376-57052359 (+)
DescriptionSimilar to ACR6: ACT domain-containing protein ACR6
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g01990 May bind amino acids. No verified direct reference in this release
At1g69040 May bind amino acids. No verified direct reference in this release
At2g03730 May bind amino acids. No verified direct reference in this release
At1g76990 May bind amino acids.
Molecular characterization of a novel gene family encoding ACT domain repeat proteins in Arabidopsis.2002 · DOI: 10.1104/pp.007484
At1g12420 May bind amino acids.
Molecular characterization of a novel gene family encoding ACT domain repeat proteins in Arabidopsis.2002 · DOI: 10.1104/pp.007484

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_023774 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006521 regulation of amino acid metabolic process Biological Process
GO:0009735 response to cytokinin Biological Process
GO:0009737 response to abscisic acid Biological Process
GO:0005829 cytosol Cellular Component
GO:0009506 plasmodesma Cellular Component
GO:0009507 chloroplast Cellular Component
GO:0016597 amino acid binding Molecular Function
KEGG gene cross-reference
ath:AT1G12420
ath:AT1G69040
ath:AT1G76990
ath:AT2G03730
ath:AT3G01990
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.449
Rank 1 · TkA06G221120 · TK1151
Nucleus0.430
Rank 2 · TkA06G221120 · TK1151
Cell membrane0.158
Rank 3 · TkA06G221120 · TK1151
Lysosome / Vacuole0.058
Rank 4 · TkA06G221120 · TK1151
Endoplasmic reticulum0.049
Rank 5 · TkA06G221120 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF26956ACT_ACR_D11-30 aa
PF24931ACT_ACR9_3rd44-112 aa
PF26956ACT_ACR_D145-118 aa
PF24914ACR10_N45-116 aa
PF13291ACT_449-93 aa
PF24926ACT_ACR9_C50-87 aa
PF13740ACT_651-89 aa
PF01842ACT55-98 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA06G221120PF26956ACT_ACR_D11302.4e-2176.1
TkA06G221120PF24931ACT_ACR9_3rd441126.9e-1039.6
TkA06G221120PF26956ACT_ACR_D1451182.4e-2176.1
TkA06G221120PF24914ACR10_N451166.6e-0935.8
TkA06G221120PF13291ACT_449932.9e-1144.6
TkA06G221120PF24926ACT_ACR9_C50875.6e-0936.5
TkA06G221120PF13740ACT_651891.1e-0525.9
TkA06G221120PF01842ACT55982.2e-2279.2
TkA06G221120PF22754bHLH-TF_ACT-like_plant56929.9e-0523.1
TkA06G221120PF22629ACT_AHAS_ss57860.004218.0
TkA06G221120PF05589DUF76878890.2512.4
TkA06G221120PF05589DUF7681391750.2512.4
TkA06G221120PF24931ACT_ACR9_3rd1762576.9e-1039.6
TkA06G221120PF24914ACR10_N1822206.6e-0935.8
TkA06G221120PF26956ACT_ACR_D11832142.4e-2176.1
TkA06G221120PF01842ACT1862222.2e-2279.2

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q9SGA0Arabidopsis thalianasp|Q9SGA0|ACR6_ARATH ACT domain-containing protein ACR661.000%Swiss-ProtHigh
Q8LJW3Arabidopsis thalianasp|Q8LJW3|ACR4_ARATH ACT domain-containing protein ACR457.000%Swiss-ProtHigh
Q9ZPQ8Arabidopsis thalianasp|Q9ZPQ8|ACR5_ARATH ACT domain-containing protein ACR552.400%Swiss-ProtHigh
O49285Arabidopsis thalianasp|O49285|ACR3_ARATH ACT domain-containing protein ACR346.400%Swiss-ProtMedium
Q9LNA5Arabidopsis thalianasp|Q9LNA5|ACR8_ARATH ACT domain-containing protein ACR846.500%Swiss-ProtMedium

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