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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA06G088360
Reference: TK1151 Chr: Chr06 Coordinates: 23595277-23596050 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

774 bp · TkA06G088360|TK1151|cDNA

ATGCCTATCTGCCCAAAAAGTTTCAGTTGCCCAAATTCGCCCCCATTCAAATACCCGTTATATAATGCCACTGACTCACAGTGTGGGTTGATCAAGGTCAATTGTACTTCGAACGGTACGGAACTTGAATTCAGAGAACAATTATATGAGATTGGTGTCAACGTAGGGCGTCATTCTTATATCCTTGTCCGTAACATAAAGTTTGAAAAACTTGTAAAGGATAGAAAGTGTGAGGCATTTACGTATGATTTCACATCCCC...

CDS

Download CDS FASTA

774 bp · TkA06G088360|TK1151|CDS

ATGCCTATCTGCCCAAAAAGTTTCAGTTGCCCAAATTCGCCCCCATTCAAATACCCGTTATATAATGCCACTGACTCACAGTGTGGGTTGATCAAGGTCAATTGTACTTCGAACGGTACGGAACTTGAATTCAGAGAACAATTATATGAGATTGGTGTCAACGTAGGGCGTCATTCTTATATCCTTGTCCGTAACATAAAGTTTGAAAAACTTGTAAAGGATAGAAAGTGTGAGGCATTTACGTATGATTTCACATCCCC...

Protein

Download Protein FASTA

257 aa · TkA06G088360|TK1151|PROTEIN

MPICPKSFSCPNSPPFKYPLYNATDSQCGLIKVNCTSNGTELEFREQLYEIGVNVGRHSYILVRNIKFEKLVKDRKCEAFTYDFTSPSPLLYSVSVIPFAQFYKCTKAPKDDAIMEAYFNESIYNRYKGCMDYNFYYKYNISDATVVSDLPPTCQVIRLPVNVQWEGNRVAEKTNIFSLLSSKFSISFKLSPSQLHNYPRTISVGNYPRFCHRFSTDLKIIIYKTVVTDYPRITRRFNSVENRWEITHGFATDFPQI

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA06G088360
TK1151 IDTkA06G088360
OH-1004 IDLXL04_024999
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)87.000
Protein coverage (%)TK1151 75.097 / OH-1004 29.066
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA06G088360
LocationChr06:23595277-23596050 (+)
DescriptionSimilar to LRK10L-1.1: LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-like 1.1
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_024999 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0007166 cell surface receptor signaling pathway Biological Process
GO:0010089 xylem development Biological Process
GO:0042631 cellular response to water deprivation Biological Process
GO:0046777 protein autophosphorylation Biological Process
GO:0048573 photoperiodism, flowering Biological Process
GO:0071215 cellular response to abscisic acid stimulus Biological Process
GO:0071456 cellular response to hypoxia Biological Process
GO:0005576 extracellular region Cellular Component
GO:0005886 plasma membrane Cellular Component
GO:0009507 chloroplast Cellular Component
GO:0004674 protein serine/threonine kinase activity Molecular Function
GO:0005524 ATP binding Molecular Function
KEGG gene cross-reference
ath:AT1G18390
ath:AT1G25390
ath:AT1G66880
ath:AT2G23450
ath:AT5G38210
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Extracellular0.344
Rank 1 · TkA06G088360 · TK1151
Cell membrane0.244
Rank 2 · TkA06G088360 · TK1151
Cytoplasm0.226
Rank 3 · TkA06G088360 · TK1151
Nucleus0.134
Rank 4 · TkA06G088360 · TK1151
Endoplasmic reticulum0.098
Rank 5 · TkA06G088360 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

No result was found for this query.

JBrowse

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