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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA06G058360
Reference: TK1151 Chr: Chr06 Coordinates: 15788049-15797227 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

2657 bp · TkA06G058360|TK1151|cDNA

ATGAAATGTAGGTGATTTATCATTTATGAACCATTTCAAAGCCGTATATGACAGCACTCTTTTAACTTCGTGGATTATGGAGAAAGAACCTATAATGGCAGAAGTATTCCTGTATATATCGACCGATTAGTTGTTTGATTAGAATATAAGCATCTTTATCTATCTCTTATTCCAAATCTTGAACTCAATGCTCTTCACAAGAAGTTATAGTTTAGTGAGGTTTGTAACCGTCCTATGTTTGTTGCTGACCATCAATCTCT...

CDS

Download CDS FASTA

2415 bp · TkA06G058360|TK1151|CDS

ATGCTCTTCACAAGAAGTTATAGTTTAGTGAGGTTTGTAACCGTCCTATGTTTGTTGCTGACCATCAATCTCTCATCAGGAACCAACATTATATCTTCAAACCAGTCTCTGATTGGAGACCACACAATCATATCCCAAGGTGGACTTTTCGAGCTTGGTTTCTTCAAAGCAGGTAACTCTTCCAACTATTACATAGGCATTTGGTACAAAGAGCTCTATCCCAATCCTCTTTCCATTATTTGGGTCGCAAATAGAGAAAC...

Protein

Download Protein FASTA

804 aa · TkA06G058360|TK1151|PROTEIN

MLFTRSYSLVRFVTVLCLLLTINLSSGTNIISSNQSLIGDHTIISQGGLFELGFFKAGNSSNYYIGIWYKELYPNPLSIIWVANRETPISDRFRSELKIVNGNLVLLNESKSQIWSTNITTTTNTTTSNSTKAVILDNGNLVLRDDSDNLNEPLWQSFDHPTHTWLPGAKLGYNNRTKKSHALKSWRRDDDPAEGIFSVELEPATREFVIKWNGSRQYWTTGSWDGRSFANVPEVLRMGYNYNFSYHTNENESYFIYSVS...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

Download Gene (CDS) Download Protein

ID Mapping

Input IDTkA06G058360
TK1151 IDTkA06G058360
OH-1004 IDLXL04_025451
Relationship / confidenceRbh High Identity Coverage Synteny / Strict
Protein identity (%)95.500
Protein coverage (%)TK1151 99.751 / OH-1004 99.751
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA06G058360
LocationChr06:15788049-15797227 (-)
DescriptionSimilar to At2g19130: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At2g19130 G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130. No verified direct reference in this release
At4g00340 Serine/threonine-protein kinase. No verified direct reference in this release
At4g21380 Involved in the regulation of cellular expansion and differentiation. No verified direct reference in this release
At1g65790 Involved in the regulation of cellular expansion and differentiation. No verified direct reference in this release
At4g27290 G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290. No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_025451 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006468 protein phosphorylation Biological Process
GO:0006955 immune response Biological Process
GO:0007165 signal transduction Biological Process
GO:0009738 abscisic acid-activated signaling pathway Biological Process
GO:0046777 protein autophosphorylation Biological Process
GO:0048544 recognition of pollen Biological Process
GO:0071215 cellular response to abscisic acid stimulus Biological Process
GO:0005576 extracellular region Cellular Component
GO:0005634 nucleus Cellular Component
GO:0005773 vacuole Cellular Component
GO:0005886 plasma membrane Cellular Component
GO:0009506 plasmodesma Cellular Component
KEGG gene cross-reference
ath:AT1G65790
ath:AT2G19130
ath:AT4G00340
ath:AT4G21380
ath:AT4G21390
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cell membrane0.854
Rank 1 · TkA06G058360 · TK1151
Endoplasmic reticulum0.085
Rank 2 · TkA06G058360 · TK1151
Cytoplasm0.065
Rank 3 · TkA06G058360 · TK1151
Nucleus0.036
Rank 4 · TkA06G058360 · TK1151
Lysosome / Vacuole0.029
Rank 5 · TkA06G058360 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF01453B_lectin79-187 aa
PF22479Pam3_gp1887-123 aa
PF01636APH127-148 aa
PF22479Pam3_gp18137-159 aa
PF22479Pam3_gp18194-221 aa
PF00954S_locus_glycop219-329 aa
PF08276PAN_2311-322 aa
PF08276PAN_2357-410 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA06G058360PF01453B_lectin791871e-31110.2
TkA06G058360PF22479Pam3_gp18871230.06614.4
TkA06G058360PF01636APH1271480.1212.8
TkA06G058360PF22479Pam3_gp181371590.06614.4
TkA06G058360PF22479Pam3_gp181942210.06614.4
TkA06G058360PF00954S_locus_glycop2193294.4e-2898.8
TkA06G058360PF08276PAN_23113224.5e-1143.4
TkA06G058360PF08276PAN_23574104.5e-1143.4
TkA06G058360PF08277PAN_33694050.07613.6
TkA06G058360PF00024PAN_13704080.0009619.7
TkA06G058360PF14295PAN_43733980.006217.3
TkA06G058360PF07714PK_Tyr_Ser-Thr4947592.3e-41142.6
TkA06G058360PF00069Pkinase4957544.8e-48164.6
TkA06G058360PF03109ABC14985210.005116.7
TkA06G058360PF03109ABC15606470.005116.7
TkA06G058360PF01636APH6056360.1212.8

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
O64477Arabidopsis thalianasp|O64477|Y2913_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At2g1913053.700%Swiss-ProtHigh
Q39203Arabidopsis thalianasp|Q39203|SD22_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD2-241.000%Swiss-ProtMedium
O81905Arabidopsis thalianasp|O81905|SD18_ARATH Receptor-like serine/threonine-protein kinase SD1-835.300%Swiss-ProtMedium
Q39086Arabidopsis thalianasp|Q39086|SD17_ARATH Receptor-like serine/threonine-protein kinase SD1-735.400%Swiss-ProtMedium
O81832Arabidopsis thalianasp|O81832|Y4729_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At4g2729034.700%Swiss-ProtMedium

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