Gene Card
Gene overview
cDNA / CDS / Protein Sequences
603 bp · TkA05G459180|TK1151|cDNA
ATGCAGCGAACCCAGGAGGACGAACGACTAAAGAAGCAGAGAAGCAGCGAAGCGGCGAACAGGCTCAATCCGGGTTTTTACAGATCCATCCGCGTTTTGACCGATCCATCCGCGTTTTGGAAAACTGGTCCGCGTTTTGCCCGATCCATCCGGATCGCGGCAGCTCTGTGCTTAGCATCGGCGGTAGATGGCGCGCCGGATCCGGACCCGTTTTATTTGCGGCGGATGCTACCGAGGATTGAGAAGTTGTTGAAGTGCGA...
603 bp · TkA05G459180|TK1151|CDS
ATGCAGCGAACCCAGGAGGACGAACGACTAAAGAAGCAGAGAAGCAGCGAAGCGGCGAACAGGCTCAATCCGGGTTTTTACAGATCCATCCGCGTTTTGACCGATCCATCCGCGTTTTGGAAAACTGGTCCGCGTTTTGCCCGATCCATCCGGATCGCGGCAGCTCTGTGCTTAGCATCGGCGGTAGATGGCGCGCCGGATCCGGACCCGTTTTATTTGCGGCGGATGCTACCGAGGATTGAGAAGTTGTTGAAGTGCGA...
Protein
Download Protein FASTA200 aa · TkA05G459180|TK1151|PROTEIN
MQRTQEDERLKKQRSSEAANRLNPGFYRSIRVLTDPSAFWKTGPRFARSIRIAAALCLASAVDGAPDPDPFYLRRMLPRIEKLLKCDSFKAKAALMTFLGSVIGVAEALEKLAMIETDLLLEYKTPCLKTFEAKKFDKVKSVRETMNQMIEAWKAIPEVQEEAQNADEIAKTRMKKSKPGWIRQNADQFSKTRMDRSKRG
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA05G459180 |
|---|---|
| TK1151 ID | TkA05G459180 |
| OH-1004 ID | LXL04_022333 |
| Relationship / confidence | Non Reciprocal Best Hit / Complex relationship |
| Protein identity (%) | 71.800 |
| Protein coverage (%) | TK1151 71.000 / OH-1004 52.616Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA05G459180 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr05:115071692-115073125 (+) | |||||||||
| Description | Similar to TOR1L3: TORTIFOLIA1-like protein 3 | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0009826 unidimensional cell growth Biological Process GO:0010031 circumnutation Biological Process GO:0170002 halotropism Biological Process GO:0005634 nucleus Cellular Component GO:0005874 microtubule Cellular Component GO:0009507 chloroplast Cellular Component GO:0010005 cortical microtubule, transverse to long axis Cellular Component GO:0055028 cortical microtubule Cellular Component GO:0008017 microtubule binding Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT1G27210 ath:AT1G50890 ath:AT1G59850 ath:AT2G07170 ath:AT5G62580 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF24714TOR1L1_N49-105 aaPF13513HEAT_EZ50-86 aaPF13513HEAT_EZ93-108 aaPF24714TOR1L1_N106-154 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA05G459180 | PF24714 | TOR1L1_N | 49 | 105 | 5e-34 | 118.6 |
| TkA05G459180 | PF13513 | HEAT_EZ | 50 | 86 | 0.2 | 12.9 |
| TkA05G459180 | PF13513 | HEAT_EZ | 93 | 108 | 0.2 | 12.9 |
| TkA05G459180 | PF24714 | TOR1L1_N | 106 | 154 | 5e-34 | 118.6 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.