Gene Card
Gene overview
cDNA / CDS / Protein Sequences
594 bp · TkA05G408300|TK1151|cDNA
ATGGTTTTTGAAGAGAATTTGGAAGAATCAAACTCCACACCACCAAGTCTATTATTGTTTTCACAACGTTTTAATTCACCGGAGTCTGGCGGTGGATTTACTCCACCACCATGTGGCGGCGGAGCCACCGTCCCGTTTCAGTGGGAGGTGGCTCCCGGAAAACCAAGACACACCACCGTGGCCACCGCCAGTGATCCGCCATCACGAGGTGGCAGGTCTTTAGATCTGCCACCAAGAATGTTTGTACCATCACCAACAAG...
594 bp · TkA05G408300|TK1151|CDS
ATGGTTTTTGAAGAGAATTTGGAAGAATCAAACTCCACACCACCAAGTCTATTATTGTTTTCACAACGTTTTAATTCACCGGAGTCTGGCGGTGGATTTACTCCACCACCATGTGGCGGCGGAGCCACCGTCCCGTTTCAGTGGGAGGTGGCTCCCGGAAAACCAAGACACACCACCGTGGCCACCGCCAGTGATCCGCCATCACGAGGTGGCAGGTCTTTAGATCTGCCACCAAGAATGTTTGTACCATCACCAACAAG...
Protein
Download Protein FASTA197 aa · TkA05G408300|TK1151|PROTEIN
MVFEENLEESNSTPPSLLLFSQRFNSPESGGGFTPPPCGGGATVPFQWEVAPGKPRHTTVATASDPPSRGGRSLDLPPRMFVPSPTSVLDGPYSLCSPKKVQSKWKKKMMMMMPLRKMIMSKDMSSSFKFRSWSWDSFTDISSRGGSGGSSSSSYDDDFSNTMDSNSKIKKVSMRHSLMFFNKTTFSILVSSKLFGS
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA05G408300 |
|---|---|
| TK1151 ID | TkA05G408300 |
| OH-1004 ID | LXL04_021586 |
| Relationship / confidence | Sequence Supported Annotation Or Model Conflict / Review |
| Protein identity (%) | 95.000 |
| Protein coverage (%) | TK1151 91.371 / OH-1004 44.444Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA05G408300 |
|---|---|
| Location | Chr05:101522354-101522947 (-) |
| Description | Similar to PHYL2.2: Phytolongin Phyl2.2 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0006623 protein targeting to vacuole Biological Process GO:0007033 vacuole organization Biological Process GO:0015031 protein transport Biological Process GO:0016192 vesicle-mediated transport Biological Process GO:0005634 nucleus Cellular Component GO:0005768 endosome Cellular Component GO:0016020 membrane Cellular Component GO:0031201 SNARE complex Cellular Component GO:0031901 early endosome membrane Cellular Component GO:0033263 CORVET complex Cellular Component |
| KEGG gene cross-reference | ath:AT1G33475 ath:AT3G54300 ath:AT4G10170 ath:AT4G27840 ath:AT5G52990 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF05097DUF68842-168 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA05G408300 | PF05097 | DUF688 | 42 | 168 | 0.0003 | 20.9 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.