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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkA05G259290
Reference: TK1151 Chr: Chr05 Coordinates: 64282449-64284010 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

1107 bp · TkA05G259290|TK1151|cDNA

ATGGAAAGAAACCTTGAGGAACGTCTGATCCTACAACAAGATTCTAAGGAAATGGATGAAGCCAAAAGTGAGAAGTCATTGTTAGCTTTTGTGCCGAATTCTCCTAGTCAAAACAATGGAAGTCGACCAACAAGCATGGTTATGAAGAAAGCACATACGGTTTTTCCAGCACACTTAGTTGCGGAAGCCATATCAACACTCCACGGGCTTGACCTAAGATGGTCAGGCCCTATCACACCACAAGAAATGGAATACGTGAA...

1107 bp · TkA05G259290|TK1151|CDS

ATGGAAAGAAACCTTGAGGAACGTCTGATCCTACAACAAGATTCTAAGGAAATGGATGAAGCCAAAAGTGAGAAGTCATTGTTAGCTTTTGTGCCGAATTCTCCTAGTCAAAACAATGGAAGTCGACCAACAAGCATGGTTATGAAGAAAGCACATACGGTTTTTCCAGCACACTTAGTTGCGGAAGCCATATCAACACTCCACGGGCTTGACCTAAGATGGTCAGGCCCTATCACACCACAAGAAATGGAATACGTGAA...

368 aa · TkA05G259290|TK1151|PROTEIN

MERNLEERLILQQDSKEMDEAKSEKSLLAFVPNSPSQNNGSRPTSMVMKKAHTVFPAHLVAEAISTLHGLDLRWSGPITPQEMEYVKQYIFAKYPEYCKGLIVEEGEKIDLYNLCSNAESSFESSMSDEKRKYSPRFISIKDSSSPSSFSATNDLDGTQLEPSKLLETLNKKSSFQGNFMSIPEIQVRNKALQNCGLQEDDYLVLFTQTFIEAMVMIGESYPFFKGNNYMTIINEKEDLIKEFVAKKESKVIVAPESWLD...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA05G259290
TK1151 IDTkA05G259290
OH-1004 IDLXL04_020622
Relationship / confidenceSequence Supported Annotation Or Model Conflict / Review
Protein identity (%)99.200
Protein coverage (%)TK1151 100.000 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA05G259290
LocationChr05:64282449-64284010 (+)
DescriptionProtein of unknown function
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_020622 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006777 Mo-molybdopterin cofactor biosynthetic process Biological Process
GO:0032324 molybdopterin cofactor biosynthetic process Biological Process
GO:0043545 molybdopterin cofactor metabolic process Biological Process
GO:0005829 cytosol Cellular Component
GO:0008265 molybdenum cofactor sulfurtransferase activity Molecular Function
GO:0016829 lyase activity Molecular Function
GO:0030151 molybdenum ion binding Molecular Function
GO:0030170 pyridoxal phosphate binding Molecular Function
KEGG gene cross-reference
bta:281226
hsa:55034
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Nucleus0.527
Rank 1 · TkA05G259290 · TK1151
Cytoplasm0.375
Rank 2 · TkA05G259290 · TK1151
Cell membrane0.107
Rank 3 · TkA05G259290 · TK1151
Endoplasmic reticulum0.055
Rank 4 · TkA05G259290 · TK1151
Golgi apparatus0.041
Rank 5 · TkA05G259290 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

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No result was found for this query.

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