How to use this page

Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkA04G194220
Reference: TK1151 Chr: Chr04 Coordinates: 50085556-50089696 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

1239 bp · TkA04G194220|TK1151|cDNA

ATGGCAGAGCACGGCGGAAGACGGCGGCAGTTGGTGCTGATAGCAAGTCCACTTCAAGGCCATATGACCCCCATGCTTCAGCTTGCCTCATACCTTCATTCCAAAGGGTTCTCCATAACCATTGCTCAGTCTGAGTACAATCGGCCAGATCCGTCTAATCACCCTGACTTCCACTTCATCCTTATGCCGTTTAACTTATCTGGCACAGGTGTTTCTTCCGGCATCATTCAATTCCTGCAAGCTCTCAATGATAACTGCAG...

1239 bp · TkA04G194220|TK1151|CDS

ATGGCAGAGCACGGCGGAAGACGGCGGCAGTTGGTGCTGATAGCAAGTCCACTTCAAGGCCATATGACCCCCATGCTTCAGCTTGCCTCATACCTTCATTCCAAAGGGTTCTCCATAACCATTGCTCAGTCTGAGTACAATCGGCCAGATCCGTCTAATCACCCTGACTTCCACTTCATCCTTATGCCGTTTAACTTATCTGGCACAGGTGTTTCTTCCGGCATCATTCAATTCCTGCAAGCTCTCAATGATAACTGCAG...

412 aa · TkA04G194220|TK1151|PROTEIN

MAEHGGRRRQLVLIASPLQGHMTPMLQLASYLHSKGFSITIAQSEYNRPDPSNHPDFHFILMPFNLSGTGVSSGIIQFLQALNDNCRPHIEKHVIQMMNTQKETSEKESIVIIYDCDNWFCAGSLAGDLGLPSIILRSSCAAFVPAYRIIPQLHQEGRFPIKDSMLQEIIPELHPFRYKDLPFIGIPIQQSLQMLTMMNPKTPPVALIFNTLEFLDQLALTQVRDLYQIPIFTIGPLHKTSPIPSTSFLNEDSTCIPWLD...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

Download Gene (CDS) Download Protein

ID Mapping

Input IDTkA04G194220
TK1151 IDTkA04G194220
OH-1004 IDLXL04_000555
Relationship / confidenceMulti Candidate From Tk1151 / Complex relationship
Protein identity (%)93.500
Protein coverage (%)TK1151 67.718 / OH-1004 97.544
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA04G194220
LocationChr04:50085556-50089696 (+)
DescriptionSimilar to UGT76H1: UDP-glycosyltransferase 76H1
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At5g59590 Possesses low quercetin 3-O-glucosyltransferase and 7-O-glucosyltransferase activities in vitro. No verified direct reference in this release
At5g38010 UDP-glycosyltransferase 76E9. No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_000555 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:1900994 (-)-secologanin biosynthetic process Biological Process
GO:0005634 nucleus Cellular Component
GO:0005737 cytoplasm Cellular Component
GO:0010294 abscisic acid glucosyltransferase activity Molecular Function
GO:0035251 UDP-glucosyltransferase activity Molecular Function
GO:0080043 quercetin 3-O-glucosyltransferase activity Molecular Function
GO:0080044 quercetin 7-O-glucosyltransferase activity Molecular Function
KEGG gene cross-reference
ath:AT5G38010
ath:AT5G59590
sly:101246393
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.760
Rank 1 · TkA04G194220 · TK1151
Nucleus0.256
Rank 2 · TkA04G194220 · TK1151
Peroxisome0.086
Rank 3 · TkA04G194220 · TK1151
Mitochondrion0.051
Rank 4 · TkA04G194220 · TK1151
Endoplasmic reticulum0.049
Rank 5 · TkA04G194220 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF26168Glyco_transf_N12-42 aa
PF00201UDPGT27-106 aa
PF26168Glyco_transf_N213-238 aa
PF00201UDPGT265-380 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA04G194220PF26168Glyco_transf_N12420.2611.9
TkA04G194220PF00201UDPGT271068.2e-2381.7
TkA04G194220PF26168Glyco_transf_N2132380.2611.9
TkA04G194220PF00201UDPGT2653808.2e-2381.7

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q9LTH2Arabidopsis thalianasp|Q9LTH2|U76E2_ARATH UDP-glycosyltransferase 76E241.600%Swiss-ProtMedium
Q9LS21Arabidopsis thalianasp|Q9LS21|U76E9_ARATH UDP-glycosyltransferase 76E942.600%Swiss-ProtMedium

JBrowse

View in Genome Browser