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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA04G070750
Reference: TK1151 Chr: Chr04 Coordinates: 18735024-18737369 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

2055 bp · TkA04G070750|TK1151|cDNA

ATGAAATCTTCATCATCAAAGAACACAATTCAGGATTATCTTCAGAGAGGGTCGTCCCTCTCTGTAGGTGATGATTCAAACTTCATGACCTCCCCCGACAACACTTTTACGTGTGGCTTCTACAACTTTGAAACCAATGCTTACTGGTTTGCAATCTGGTATACAAACTCCATAGACCGCACCGTGGTTTGGACTGCAAACACCAACAAACCTATCAATGGCAAAGGCTCAAAGTTGACACTTCAGCCAAATGGTGCCAT...

CDS

Download CDS FASTA

2055 bp · TkA04G070750|TK1151|CDS

ATGAAATCTTCATCATCAAAGAACACAATTCAGGATTATCTTCAGAGAGGGTCGTCCCTCTCTGTAGGTGATGATTCAAACTTCATGACCTCCCCCGACAACACTTTTACGTGTGGCTTCTACAACTTTGAAACCAATGCTTACTGGTTTGCAATCTGGTATACAAACTCCATAGACCGCACCGTGGTTTGGACTGCAAACACCAACAAACCTATCAATGGCAAAGGCTCAAAGTTGACACTTCAGCCAAATGGTGCCAT...

Protein

Download Protein FASTA

684 aa · TkA04G070750|TK1151|PROTEIN

MKSSSSKNTIQDYLQRGSSLSVGDDSNFMTSPDNTFTCGFYNFETNAYWFAIWYTNSIDRTVVWTANTNKPINGKGSKLTLQPNGAMVLTDVDGTFVWTTNPTSTDVNRAMLLNTGNLVVVNKKGEILWQSFDYPTNTLLPSQRLTKSTNLISALRKRSFEPGYFSLRYDTKNVLTLFYDGPEISSVYWPSPNPNYNVFQFGRTSNFNNSRYAMFNDLGVFDSTDGWQFNASDMGLGIKRRLTMDYDGNLRFYSLNELTG...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

Download Gene (CDS) Download Protein

ID Mapping

Input IDTkA04G070750
TK1151 IDTkA04G070750
OH-1004 IDLXL04_036154
Relationship / confidenceMulti Source To Oh1004 / Complex relationship
Protein identity (%)76.100
Protein coverage (%)TK1151 99.415 / OH-1004 99.743
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA04G070750
LocationChr04:18735024-18737369 (+)
DescriptionSimilar to PK1: Putative receptor protein kinase ZmPK1
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g34300 G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300. No verified direct reference in this release
At4g00340 Serine/threonine-protein kinase. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os04g0201900 Involved in innate immunity. No verified direct reference in this release
UniProt: A0A075F7E9 Involved in innate immunity. No verified direct reference in this release
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_036154 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006952 defense response Biological Process
GO:0048544 recognition of pollen Biological Process
GO:0051707 response to other organism Biological Process
GO:0005576 extracellular region Cellular Component
GO:0005634 nucleus Cellular Component
GO:0005886 plasma membrane Cellular Component
GO:0016020 membrane Cellular Component
GO:0004672 protein kinase activity Molecular Function
GO:0004674 protein serine/threonine kinase activity Molecular Function
GO:0005516 calmodulin binding Molecular Function
GO:0005524 ATP binding Molecular Function
GO:0030246 carbohydrate binding Molecular Function
KEGG gene cross-reference
ath:AT1G34300
ath:AT2G19130
ath:AT5G24080
zma:542378
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cell membrane0.761
Rank 1 · TkA04G070750 · TK1151
Endoplasmic reticulum0.094
Rank 2 · TkA04G070750 · TK1151
Cytoplasm0.078
Rank 3 · TkA04G070750 · TK1151
Extracellular0.056
Rank 4 · TkA04G070750 · TK1151
Lysosome / Vacuole0.044
Rank 5 · TkA04G070750 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF01453B_lectin61-149 aa
PF00954S_locus_glycop93-98 aa
PF00954S_locus_glycop239-300 aa
PF01453B_lectin264-274 aa
PF00024PAN_1333-378 aa
PF14295PAN_4335-375 aa
PF08276PAN_2345-378 aa
PF00069Pkinase433-457 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA04G070750PF01453B_lectin611491e-2281.3
TkA04G070750PF00954S_locus_glycop93981.1e-0836.3
TkA04G070750PF00954S_locus_glycop2393001.1e-0836.3
TkA04G070750PF01453B_lectin2642741e-2281.3
TkA04G070750PF00024PAN_13333780.00218.7
TkA04G070750PF14295PAN_43353750.0008220.1
TkA04G070750PF08276PAN_23453782.8e-0524.9
TkA04G070750PF00069Pkinase4334571.6e-37130.1
TkA04G070750PF07714PK_Tyr_Ser-Thr4334591.2e-2384.5
TkA04G070750PF03109ABC14384550.000320.7
TkA04G070750PF00069Pkinase4656741.6e-37130.1
TkA04G070750PF07714PK_Tyr_Ser-Thr4656121.2e-2384.5
TkA04G070750PF03109ABC14685460.000320.7
TkA04G070750PF12260PIP49_C4695400.01415.7
TkA04G070750PF13680DUF41525796470.05813.5
TkA04G070750PF03109ABC15856770.000320.7

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q9XID3Arabidopsis thalianasp|Q9XID3|Y1343_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase At1g3430030.900%Swiss-ProtMedium
Q39203Arabidopsis thalianasp|Q39203|SD22_ARATH G-type lectin S-receptor-like serine/threonine-protein kinase SD2-230.000%Swiss-ProtMedium
Q7FAZ3Oryza sativa subsp. japonicasp|Q7FAZ3|LERK1_ORYSJ G-type lectin S-receptor-like serine/threonine-protein kinase LECRK129.700%Swiss-ProtLow
A0A075F7E9Oryza sativa subsp. indicasp|A0A075F7E9|LERK1_ORYSI G-type lectin S-receptor-like serine/threonine-protein kinase LECRK129.300%Swiss-ProtLow

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