Gene Card
Gene overview
cDNA / CDS / Protein Sequences
1171 bp · TkA04G001640|TK1151|cDNA
TTATTTTAATGTGACAAAAAACTTATACAATTATACTACTATATAAGGTTTTTATATTTAACCGTGTCAAACACAATAACCTCGTCGGCATTGTATTGGGATTTTTTCTGATAAATAATGTCAAACAGATCTCCCGTTCAATTCTAAATTCGTTCAGTAGCTCAGATGTCGGCATTTTTTTCAAAGTCTTCTCTAAATTGCCGACGCAAAGTGGCAGAGAATCAACCATTACTGAACGATCATCAGGAAGATGATGAAGA...
636 bp · TkA04G001640|TK1151|CDS
ATGGTGTTGCTATTGAGAAAATACGCTTGTTTGGCCATCCTGCAGAGGATAGCAATCGGATATATTGCTGCAGCAGTGTGTGAAATCTGGCTTCCATGTCAAACTTTTAAAAAGGAACCATTCTTCAGGGTTTATATTTGGCACTGGTGTGCTGTAATTTTGTTGTCGGCCATCTACATGGGATTGACATATGGGTTGTACGTTGCAGATTGGAAGTTCAAGGACTTGTACTCCTTATCTTCTTTGATTTCAGAAAATGG...
Protein
Download Protein FASTA211 aa · TkA04G001640|TK1151|PROTEIN
MVLLLRKYACLAILQRIAIGYIAAAVCEIWLPCQTFKKEPFFRVYIWHWCAVILLSAIYMGLTYGLYVADWKFKDLYSLSSLISENGTTIHTVRCSNRGDLGPGCNAAGMIDRYVLGILHLYQKSAYRNLEKSSISKRGQVSDSSPSWCYAPFEPEGILSSLTASVACIIGLQYGHILGFMGSIINKLAPNPELSPILKSMNIQMPNTSTR
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA04G001640 |
|---|---|
| TK1151 ID | TkA04G001640 |
| OH-1004 ID | LXL04_037120 |
| Relationship / confidence | Sequence Supported Annotation Or Model Conflict / Review |
| Protein identity (%) | 98.000 |
| Protein coverage (%) | TK1151 93.365 / OH-1004 57.602Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA04G001640 |
|---|---|
| Location | Chr04:410394-413702 (-) |
| Description | Similar to Hgsnat: Heparan-alpha-glucosaminide N-acetyltransferase |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0007041 lysosomal transport Biological Process GO:0030200 heparan sulfate proteoglycan catabolic process Biological Process GO:0051259 protein complex oligomerization Biological Process GO:0005765 lysosomal membrane Cellular Component GO:0005886 plasma membrane Cellular Component GO:0043202 lysosomal lumen Cellular Component GO:0070821 tertiary granule membrane Cellular Component GO:0015019 heparan-alpha-glucosaminide N-acetyltransferase activity Molecular Function GO:0016746 acyltransferase activity Molecular Function |
| KEGG gene cross-reference | hsa:138050 mmu:52120 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.