Gene Card
Gene overview
cDNA / CDS / Protein Sequences
321 bp · TkA03G609380|TK1151|cDNA
CCGAAATCCTTTTGGACTTTTGGTCCAAAATCTCGATCCTCAGTTACAATCCGCATTCCGCCGCCACCTAAACCACTCTCGGAAACGACAACCAATTTTAGTGGCACCCTCGCCGGAGATCTCATGTGGCCGTCTCTAAGGCACCGGACTCTTTCCCTCTCCTCGGAAGTTATTCATCAATGGTTGTCAGGTGCTAATCGCACGTTTTGTTCTTCGGTAATAAATGCTACAAACACCAACGGAAAAAGTGGAAATGTTGT...
321 bp · TkA03G609380|TK1151|CDS
CCGAAATCCTTTTGGACTTTTGGTCCAAAATCTCGATCCTCAGTTACAATCCGCATTCCGCCGCCACCTAAACCACTCTCGGAAACGACAACCAATTTTAGTGGCACCCTCGCCGGAGATCTCATGTGGCCGTCTCTAAGGCACCGGACTCTTTCCCTCTCCTCGGAAGTTATTCATCAATGGTTGTCAGGTGCTAATCGCACGTTTTGTTCTTCGGTAATAAATGCTACAAACACCAACGGAAAAAGTGGAAATGTTGT...
Protein
Download Protein FASTA106 aa · TkA03G609380|TK1151|PROTEIN
PKSFWTFGPKSRSSVTIRIPPPPKPLSETTTNFSGTLAGDLMWPSLRHRTLSLSSEVIHQWLSGANRTFCSSVINATNTNGKSGNVVELLKVEKILTDVRADECEK
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA03G609380 |
|---|---|
| TK1151 ID | TkA03G609380 |
| OH-1004 ID | LXL04_011660 |
| Relationship / confidence | Non Reciprocal Best Hit / Complex relationship |
| Protein identity (%) | 89.200 |
| Protein coverage (%) | TK1151 58.491 / OH-1004 33.854Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA03G609380 |
|---|---|
| Location | Chr03:154747399-154747719 (-) |
| Description | Similar to At1g67620: Protein Iojap-related, mitochondrial |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0017148 negative regulation of translation Biological Process GO:0042256 cytosolic ribosome assembly Biological Process GO:0090071 negative regulation of ribosome biogenesis Biological Process GO:0005737 cytoplasm Cellular Component GO:0005739 mitochondrion Cellular Component GO:0005829 cytosol Cellular Component GO:0043023 ribosomal large subunit binding Molecular Function |
| KEGG gene cross-reference | ath:AT1G67620 ecc:c0728 ecj:JW5090 eco:b0637 ecoc:C3026_03185 pau:PA14_12030 sfx:S0666 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.