Gene Card
Gene overview
cDNA / CDS / Protein Sequences
306 bp · TkA03G586040|TK1151|cDNA
ATGCCCAAGAACATTCCAAATCCACCTCTACACGACATCAACAACAAACGGTTGATCCATCATCGGAATCGTTCCGGCGAACTTACCGTCTTTGAGGCCGCCGCCCGTTACTTTGAAGACACCGACACCACTCTCTCTCATAAACATTACATGAGAGAGAGTGTCGGAAGACTGAGTCTTGATATCCCAAACAATCGAAGAACCTCCGTCCCTTTACACACCAGGATGATGGAGATGGAGAATACCCGACAATCGATACC...
306 bp · TkA03G586040|TK1151|CDS
ATGCCCAAGAACATTCCAAATCCACCTCTACACGACATCAACAACAAACGGTTGATCCATCATCGGAATCGTTCCGGCGAACTTACCGTCTTTGAGGCCGCCGCCCGTTACTTTGAAGACACCGACACCACTCTCTCTCATAAACATTACATGAGAGAGAGTGTCGGAAGACTGAGTCTTGATATCCCAAACAATCGAAGAACCTCCGTCCCTTTACACACCAGGATGATGGAGATGGAGAATACCCGACAATCGATACC...
Protein
Download Protein FASTA101 aa · TkA03G586040|TK1151|PROTEIN
MPKNIPNPPLHDINNKRLIHHRNRSGELTVFEAAARYFEDTDTTLSHKHYMRESVGRLSLDIPNNRRTSVPLHTRMMEMENTRQSIPLKAMMMDPNPNPTT
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA03G586040 |
|---|---|
| TK1151 ID | TkA03G586040 |
| OH-1004 ID | LXL04_011391 |
| Relationship / confidence | Sequence Supported Annotation Or Model Conflict / Review |
| Protein identity (%) | 97.000 |
| Protein coverage (%) | TK1151 99.010 / OH-1004 10.206Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA03G586040 |
|---|---|
| Location | Chr03:148868712-148869017 (+) |
| Description | Similar to SYNC1: Asparagine--tRNA ligase, cytoplasmic 1 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0006421 asparaginyl-tRNA aminoacylation Biological Process GO:0009793 embryo development ending in seed dormancy Biological Process GO:0048481 plant ovule development Biological Process GO:0005737 cytoplasm Cellular Component GO:0005739 mitochondrion Cellular Component GO:0005829 cytosol Cellular Component GO:0009507 chloroplast Cellular Component GO:0009536 plastid Cellular Component GO:0009570 chloroplast stroma Cellular Component GO:0003676 nucleic acid binding Molecular Function GO:0003677 DNA binding Molecular Function GO:0004816 asparagine-tRNA ligase activity Molecular Function |
| KEGG gene cross-reference | ath:AT1G70980 ath:AT3G07420 ath:AT4G17300 ath:AT5G56680 gsu:GSU1156 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.