Gene Card
Gene overview
cDNA / CDS / Protein Sequences
619 bp · TkA03G550960|TK1151|cDNA
AAAATACAACCCTCTCTCTCTCTCTCTTCCTCCCTCCCACCATCTCTCTCTCTCTCTCTCATCGGGTGTTTCTGTGTTTCTCGTTTTGTCTCATATATAGATTCAATCAATTTCCGGGTGCTTAGGGCTAGGATTCGGATCAATTCCACAGTGAGATCTGTTTCTCGTTTTGTCAAAAACTGTGTTTCTCGCTTTGTCCCACGGGTGTTTCGGCTTTCATTCGCCTTTTCTTCTCACGATGATTTAGACCTAGAAATGAG...
375 bp · TkA03G550960|TK1151|CDS
AAAATACAACCCTCTCTCTCTCTCTCTTCCTCCCTCCCACCATCTCTCTCTCTCTCTCTCATCGGGTGTTTCTGTGTTTCTCGTTTTGTCTCATATATAGATTCAATCAATTTCCGGGTGCTTAGGGCTAGGATTCGGATCAATTCCACAGTGAGATCTGTTTCTCGTTTTGTCAAAAACTGTGTTTCTCGCTTTGTCCCACGGGTGTTTCGGCTTTCATTCGCCTTTTCTTCTCACGATGATTTAGACCTAGAAATGAG...
Protein
Download Protein FASTA124 aa · TkA03G550960|TK1151|PROTEIN
KIQPSLSLSSSLPPSLSLSLIGCFCVSRFVSYIDSINFRVLRARIRINSTVRSVSRFVKNCVSRFVPRVFRLSFAFSSHDDLDLEMSHQIINPTRPQLYETEESRSSRGRHIPSHLGKNRATSA
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA03G550960 |
|---|---|
| TK1151 ID | TkA03G550960 |
| OH-1004 ID | LXL04_021460 |
| Relationship / confidence | Non Reciprocal Best Hit / Complex relationship |
| Protein identity (%) | 52.400 |
| Protein coverage (%) | TK1151 44.355 / OH-1004 28.241Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA03G550960 |
|---|---|
| Location | Chr03:139447317-139448189 (-) |
| Description | Similar to ADH9: Alcohol dehydrogenase 9 |
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene ArabidopsisNo hit for this species in the current source table. RiceNo hit for this species in the current source table. |
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · |
| GO annotations (OH1004 source) | GO:0009809 lignin biosynthetic process Biological Process GO:0009820 alkaloid metabolic process Biological Process GO:0000166 nucleotide binding Molecular Function GO:0008270 zinc ion binding Molecular Function GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor Molecular Function GO:0045551 cinnamyl-alcohol dehydrogenase activity Molecular Function GO:0050268 coniferyl-alcohol dehydrogenase activity Molecular Function |
| KEGG gene cross-reference | ag:AKM12281 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
No result was found for this query.
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.
No result was found for this query.