How to use this page

Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkA03G512410
Reference: TK1151 Chr: Chr03 Coordinates: 128551120-128551467 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

348 bp · TkA03G512410|TK1151|cDNA

ATGATTAAGGCTCATCTGATTTTAAGTCTGTCCGGCCTGATTTTTAGTAGGTTGGCTGATTTTTCATCTGTTTTGACTGATTTTAACTCTATTTGGTGTGATTTCGGGTCGGAACCCGATCCAAACCCGACCCGGGTATATAAGAAATTAAACCCTAAATTTCTCCATTCTTCTCCAATCCGGCCGCGAACACAGGTCTTTCTCTCACCCCGGCGATTTCCGGCGACACTCTACAGGTGCCATTTCCGGCGATTTTCCGA...

348 bp · TkA03G512410|TK1151|CDS

ATGATTAAGGCTCATCTGATTTTAAGTCTGTCCGGCCTGATTTTTAGTAGGTTGGCTGATTTTTCATCTGTTTTGACTGATTTTAACTCTATTTGGTGTGATTTCGGGTCGGAACCCGATCCAAACCCGACCCGGGTATATAAGAAATTAAACCCTAAATTTCTCCATTCTTCTCCAATCCGGCCGCGAACACAGGTCTTTCTCTCACCCCGGCGATTTCCGGCGACACTCTACAGGTGCCATTTCCGGCGATTTTCCGA...

115 aa · TkA03G512410|TK1151|PROTEIN

MIKAHLILSLSGLIFSRLADFSSVLTDFNSIWCDFGSEPDPNPTRVYKKLNPKFLHSSPIRPRTQVFLSPRRFPATLYRCHFRRFSDETRRLQPFPPVIPLSRLLVVRREAKSPT

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

Download Gene (CDS) Download Protein

ID Mapping

Input IDTkA03G512410
TK1151 IDTkA03G512410
OH-1004 IDLXL04_024897
Relationship / confidenceNon Reciprocal Best Hit / Complex relationship
Protein identity (%)63.000
Protein coverage (%)TK1151 66.957 / OH-1004 31.034
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA03G512410
LocationChr03:128551120-128551467 (+)
DescriptionSimilar to NDT1: Nicotinamide adenine dinucleotide transporter 1, chloroplastic
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_024897 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006850 pyruvate import into mitochondria Biological Process
GO:0035352 NAD transmembrane transport Biological Process
GO:0043132 NAD transport Biological Process
GO:0160007 glutathione import into mitochondrion Biological Process
GO:1990542 mitochondrial transmembrane transport Biological Process
GO:1990549 mitochondrial NAD transmembrane transport Biological Process
GO:0005739 mitochondrion Cellular Component
GO:0005743 mitochondrial inner membrane Cellular Component
GO:0005783 endoplasmic reticulum Cellular Component
GO:0031966 mitochondrial membrane Cellular Component
GO:0031969 chloroplast membrane Cellular Component
GO:0015297 antiporter activity Molecular Function
KEGG gene cross-reference
ath:AT1G25380
ath:AT2G47490
dme:Dmel_CG14209
sce:YIL006W
spo:2541928
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Nucleus0.475
Rank 1 · TkA03G512410 · TK1151
Cytoplasm0.461
Rank 2 · TkA03G512410 · TK1151
Cell membrane0.074
Rank 3 · TkA03G512410 · TK1151
Mitochondrion0.066
Rank 4 · TkA03G512410 · TK1151
Endoplasmic reticulum0.065
Rank 5 · TkA03G512410 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

No result was found for this query.

JBrowse

View in Genome Browser