Gene Card
Gene overview
cDNA / CDS / Protein Sequences
3099 bp · TkA03G359670|TK1151|cDNA
ATAAGATTTTCGTTTAATGTCGATTAATTTTGGTACTATACAGGATTTTTGTTTAGGCCGGAAAGAACAAGAGAAATGCCCAGAGTAGATATACAGATTTTCCTATTGACAATCTCTGAACGACACAAGTTTTGATGCGAATTTTTTCCTCATTTCAATGTTTTAGCGAACCTATCCTCGAGAGGTCAAAACATGTAATCGTTGTCCCATCAAATCACTTGAACTTCTGTTTGAGTCTTCTGGAATCGGTCCCTTTGCCT...
1278 bp · TkA03G359670|TK1151|CDS
ATGGTTTCTGAACCGCTTTTTTGGATTACCGCTTTAAAATTTGTTGGCAAAAAGACGTTGCCGGTTCAGCAGCTAACGTGCGCATATGGGATCATCCGTATAATTTCGTCCGACATGACGTGGCAGGTTGATTTGCCATACGGCTATTGTGGGCCAATTATTAACCAACAAATAACAATGACTTGTCCAGTTTTAAGCCGTTCATTTCCCTTCTTTCCGGTCACTACTACGCTGCCATTTTTTGTGTCACTCATCAACTC...
Protein
Download Protein FASTA425 aa · TkA03G359670|TK1151|PROTEIN
MVSEPLFWITALKFVGKKTLPVQQLTCAYGIIRIISSDMTWQVDLPYGYCGPIINQQITMTCPVLSRSFPFFPVTTTLPFFVSLINSSQFIGSSSMSLGKKINVGMHGFRRIGRFVSGFAPPKLSNVNGPTKITDFKAHLPSAYFVSEQGQDGSRSGALRVFTLLGAGISGFLSFGTVAYASDEAEHGLASPSYPWPHQGILSSYDHASIRRGHQVYQQVCASCHSMSLISYRDLVGVAYTEEETKAMAAEIEVVDGPND...
Flanking Sequence Download
Sequence orientation and download details
Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.
ID Mapping
| Input ID | TkA03G359670 |
|---|---|
| TK1151 ID | TkA03G359670 |
| OH-1004 ID | LXL04_008551 |
| Relationship / confidence | Rbh High Identity Coverage Synteny / Strict |
| Protein identity (%) | 100.000 |
| Protein coverage (%) | TK1151 100.000 / OH-1004 100.000Coverage and evidenceCoverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation. |
| Source version | TK1151 / GWHBCHF00000000 |
SNP / Indel variants and carrier samplesCRA009020 · TK1151
Expand to load variant records for this gene.
Basic Information and Functional Annotation
| Gene ID | TkA03G359670 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Location | Chr03:88751498-88757223 (+) | |||||||||
| Description | Similar to CYCL: Cytochrome c1-1, heme protein, mitochondrial | |||||||||
| Arabidopsis / Rice Reference Genes and Papers |
Download references for this gene Arabidopsis
RiceNo hit for this species in the current source table. | |||||||||
| Functional annotation source | View annotation sourcesFunctional annotation source: OH1004 · | |||||||||
| GO annotations (OH1004 source) | GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c Biological Process GO:0022904 respiratory electron transport chain Biological Process GO:0045333 cellular respiration Biological Process GO:0000325 plant-type vacuole Cellular Component GO:0005739 mitochondrion Cellular Component GO:0005743 mitochondrial inner membrane Cellular Component GO:0005758 mitochondrial intermembrane space Cellular Component GO:0005773 vacuole Cellular Component GO:0005829 cytosol Cellular Component GO:0009536 plastid Cellular Component GO:0045275 respiratory chain complex III Cellular Component GO:0008121 quinol-cytochrome-c reductase activity Molecular Function | |||||||||
| KEGG gene cross-reference | ath:AT3G27240 ath:AT5G40810 sce:YOR065W sot:102589911 These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene. |
Gene expression
View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.
Data sources and gene correspondence
Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.
Subcellular Localization Top 5
Computational predictions or homology annotations below do not replace localization experiments.
LocPro · Direct prediction · Computational prediction, not experimental localization
Predicted Functional Domains
Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.
PF02167Cytochrom_C1196-413 aaPF13442Cytochrome_CBB3209-227 aaPF00034Cytochrom_C211-241 aa| Gene ID | Domain ID | Domain Name | Start aa | End aa | E-value | Score |
|---|---|---|---|---|---|---|
| TkA03G359670 | PF02167 | Cytochrom_C1 | 196 | 413 | 7.6e-100 | 333.8 |
| TkA03G359670 | PF13442 | Cytochrome_CBB3 | 209 | 227 | 0.0016 | 19.4 |
| TkA03G359670 | PF00034 | Cytochrom_C | 211 | 241 | 0.07 | 15.1 |
Arabidopsis / Rice Protein Homology
Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.