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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA03G158060
Reference: TK1151 Chr: Chr03 Coordinates: 40081059-40096553 Strand: + Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

7930 bp · TkA03G158060|TK1151|cDNA

CATTAACTCATATTTGTGAGAGGAAAAATAGGGTTTTTGCCTGTTACATTTCGTCGCATCACACCCCACTCCCTTCTCTGGACACTGCTCTGGAACACTTGGTAAACCCTATGAATTTGGTGAATAAAATCGTCGTCGATCTCCGATCAAGCTAAATTCAGCCACGGCGGAACGCTACTCACCAACAGTCTTCGAATCTTTGTGTAAATAAATCAATCAAGGTGGGCAATTGCTTGCCCACCCTAGAAACTTCCCCCTTC...

CDS

Download CDS FASTA

7401 bp · TkA03G158060|TK1151|CDS

ATGGCGGCTCCTGCGCAATCCTATCGTTTTGGCGGTCCGGCCACCACAGCAGCTGCTGCCGGGAATATCGAAGCTCTTAACAGAGTCCTTTCCGACCTTTGTACTAGAGGCGCCCCAAAGGATGGTTCTGCTTTTGCTTTAAGAAAACATGTTGAAGAAGAAGCACGTGCTCTTAGTGGAGAAGCCTTTTCTCGTTTCATGGATCAATTATATGATCGAATCACTACTCTTCTAGAGAGCAATGATGTTGCTGACAATTT...

Protein

Download Protein FASTA

2466 aa · TkA03G158060|TK1151|PROTEIN

MAAPAQSYRFGGPATTAAAAGNIEALNRVLSDLCTRGAPKDGSAFALRKHVEEEARALSGEAFSRFMDQLYDRITTLLESNDVADNLGALRATDELIDLRLGESGTKVSKFSNYMRIVFDTKRDPEILILASKVLGHLARAGGAMTADEVECQVKNALKWLGGERVEYRRFAAVLILKEMAENASTVFNVHVPEFVDAIWVALRDPTLAVRERAVEALRACLRVIEKRETRWRVQWYYRMFEATQDGLGKNASVHSIHGS...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

Download Gene (CDS) Download Protein

ID Mapping

Input IDTkA03G158060
TK1151 IDTkA03G158060
OH-1004 IDLXL04_007334
Relationship / confidenceRbh Sequence Supported / Probable
Protein identity (%)97.500
Protein coverage (%)TK1151 100.000 / OH-1004 100.000
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA03G158060
LocationChr03:40081059-40096553 (+)
DescriptionSimilar to TOR: Serine/threonine-protein kinase TOR
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At1g50030 Essential cell growth regulator that controls development from early embryo to seed production. No verified direct reference in this release

Rice

Reference gene IDPossible functionPapers / DOI
Os05g0235300 Component of TORC1 complex, which is an essential cell growth regulator that controls plant development. No verified direct reference in this release
Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_007334 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0000122 negative regulation of transcription by RNA polymerase II Biological Process
GO:0001558 regulation of cell growth Biological Process
GO:0006935 chemotaxis Biological Process
GO:0006952 defense response Biological Process
GO:0007584 response to nutrient Biological Process
GO:0009267 cellular response to starvation Biological Process
GO:0009303 rRNA transcription Biological Process
GO:0009615 response to virus Biological Process
GO:0009630 gravitropism Biological Process
GO:0009688 abscisic acid biosynthetic process Biological Process
GO:0009733 response to auxin Biological Process
GO:0009734 auxin-activated signaling pathway Biological Process
KEGG gene cross-reference
ath:AT1G50030
ddi:DDB_G0281569
dosa:Os05g0235300
spo:2540473
spo:2540720
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.474
Rank 1 · TkA03G158060 · TK1151
Nucleus0.314
Rank 2 · TkA03G158060 · TK1151
Golgi apparatus0.181
Rank 3 · TkA03G158060 · TK1151
Lysosome / Vacuole0.130
Rank 4 · TkA03G158060 · TK1151
Cell membrane0.113
Rank 5 · TkA03G158060 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF24714TOR1L1_N42-141 aa
PF23271HEAT_GCN1154-236 aa
PF24987HEAT_EF3_N169-228 aa
PF13513HEAT_EZ170-219 aa
PF25786HEAT_GCN1_C172-227 aa
PF25782TPR_CAND1172-226 aa
PF24714TOR1L1_N173-333 aa
PF20416UTP20173-226 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA03G158060PF24714TOR1L1_N421413.3e-0937.2
TkA03G158060PF23271HEAT_GCN11542361.8e-1455.0
TkA03G158060PF24987HEAT_EF3_N1692280.001519.2
TkA03G158060PF13513HEAT_EZ1702194.5e-1350.1
TkA03G158060PF25786HEAT_GCN1_C1722271.7e-0525.6
TkA03G158060PF25782TPR_CAND11722260.01516.4
TkA03G158060PF24714TOR1L1_N1733333.3e-0937.2
TkA03G158060PF20416UTP201732260.04114.0
TkA03G158060PF12717Cnd11802171.6e-0628.9
TkA03G158060PF25757TPR_DNAAF51832290.01515.3
TkA03G158060PF13646HEAT_21912193.6e-0731.1
TkA03G158060PF01602Adaptin_N1953051.2e-0524.9
TkA03G158060PF02985HEAT1962243.4e-0524.4
TkA03G158060PF23227HEAT_MROH2B_C2023181.2e-0525.5
TkA03G158060PF21581SCD2022220.07114.1
TkA03G158060PF13181TPR_82122240.003718.0

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q9FR53Arabidopsis thalianasp|Q9FR53|TOR_ARATH Serine/threonine-protein kinase TOR80.100%Swiss-ProtHigh
Q0DJS1Oryza sativa subsp. japonicasp|Q0DJS1|TOR_ORYSJ Serine/threonine-protein kinase TOR76.000%Swiss-ProtHigh

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