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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp
Examples TkA01G624900 LXL04_000258

Gene overview

TkA02G585150
Reference: TK1151 Chr: Chr02 Coordinates: 150992523-150996546 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

cDNA

Download cDNA FASTA

3943 bp · TkA02G585150|TK1151|cDNA

CTTCAACTTACGTCTATATTACAACTCAATCCCCTTACCTTTGCTCAGCTTTTACGTATGACCCCATGGCCACCAACTGTTAATGCCTACGTGTAAAACAGCTCACTATTACCCACTGATGTATGGACGCGTGTCCACCCCTAAATATACGGGCCCCACGTCCCTCCCCCTTCTTCAATCTCTTTGCCTAAATAAAGTTATGTATTTTTCCTGTCTGAGAGAATATCAGTGTTTGAGTGAGAAAGAGAAAAACCTAGAGA...

CDS

Download CDS FASTA

2922 bp · TkA02G585150|TK1151|CDS

ATGAGAAAGTTGCTTGGTATCTGTCTGTTTTTGCTAGCGGCTCATGTTATTATTGTGAAATCTTTGAATCCAACTCTAGACGATGATGTGCTGGGCTTGATTGTATTTAAGGCAGACCTGCAAGATCCAGATGGTAAATTGGTTTCCTGGAATGAAGATGATGATAGTCCTTGTAAGTGGAAAGGTGTTAAGTGTAACCCTAGATCTAACAGGGTATCTGACCTTGTTCTCGACGGGTTTGGGCTCTCGGGAAAGATGGG...

Protein

Download Protein FASTA

973 aa · TkA02G585150|TK1151|PROTEIN

MRKLLGICLFLLAAHVIIVKSLNPTLDDDVLGLIVFKADLQDPDGKLVSWNEDDDSPCKWKGVKCNPRSNRVSDLVLDGFGLSGKMGRGLMQLTFLTKLSLAKNNLTGSIGVNLAQLVNLRVINLSGNGFSGPVPSNFFEQCGSLRSISLANNKFSGKIPDSLVSCSSLGVLNFSSNQFSGVLPSGIWSLNGLRSLDLSDNILEGEIPKEVEGLYNLREINLSKNQFTGQVPDEIGACALLRSVDLSENSLSGVLPSTLQ...

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

Download Gene (CDS) Download Protein

ID Mapping

Input IDTkA02G585150
TK1151 IDTkA02G585150
OH-1004 IDLXL04_012152
Relationship / confidenceRbh Below Probable Coverage Or Synteny Threshold / Review
Protein identity (%)100.000
Protein coverage (%)TK1151 100.000 / OH-1004 67.616
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
Open Full ID Mapping
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA02G585150
LocationChr02:150992523-150996546 (-)
DescriptionSimilar to IRK: Probable LRR receptor-like serine/threonine-protein kinase IRK
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

Reference gene IDPossible functionPapers / DOI
At3g56370 Probable LRR receptor-like serine/threonine-protein kinase IRK. No verified direct reference in this release
At5g01890 Leucine-rich repeat receptor-like protein kinase that may play a role in vascular tissues development. No verified direct reference in this release
At3g28040 Probably inactive leucine-rich repeat receptor-like protein kinase At3g28040. No verified direct reference in this release
At1g12460 Probable LRR receptor-like serine/threonine-protein kinase At1g12460. No verified direct reference in this release
At1g01540 Probable serine/threonine-protein kinase At1g01540. No verified direct reference in this release

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_012152 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0006468 protein phosphorylation Biological Process
GO:0010067 procambium histogenesis Biological Process
GO:0010087 phloem or xylem histogenesis Biological Process
GO:0010183 pollen tube guidance Biological Process
GO:0030154 cell differentiation Biological Process
GO:0046777 protein autophosphorylation Biological Process
GO:0048364 root development Biological Process
GO:0051302 regulation of cell division Biological Process
GO:0090511 periclinal cell division Biological Process
GO:0005886 plasma membrane Cellular Component
GO:0009507 chloroplast Cellular Component
GO:0090406 pollen tube Cellular Component
KEGG gene cross-reference
ath:AT1G12460
ath:AT3G28040
ath:AT3G56370
ath:AT4G28650
ath:AT5G01890
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.
Open Annotation Module

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

View expression for this gene
Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cell membrane0.866
Rank 1 · TkA02G585150 · TK1151
Endoplasmic reticulum0.089
Rank 2 · TkA02G585150 · TK1151
Cytoplasm0.061
Rank 3 · TkA02G585150 · TK1151
Nucleus0.043
Rank 4 · TkA02G585150 · TK1151
Lysosome / Vacuole0.027
Rank 5 · TkA02G585150 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Open Subcellular Module

Predicted Functional Domains

Domain results are from Pfam-A/HMMER; positions are amino-acid coordinates on the protein sequence.

PF08263LRRNT_226-66 aa
PF24758LRR_At5g5637087-154 aa
PF23211LRR_LRWD192-155 aa
PF13855LRR_893-129 aa
PF13516LRR_693-115 aa
PF29594LRR_SKP294-224 aa
PF00560LRR_196-116 aa
PF12799LRR_496-128 aa
Gene IDDomain IDDomain NameStart aaEnd aaE-valueScore
TkA02G585150PF08263LRRNT_226662.9e-1247.4
TkA02G585150PF24758LRR_At5g56370871543.1e-0627.7
TkA02G585150PF23211LRR_LRWD1921550.0001822.0
TkA02G585150PF13855LRR_8931291.2e-43147.4
TkA02G585150PF13516LRR_6931157.6e-1554.4
TkA02G585150PF29594LRR_SKP2942241.6e-0525.0
TkA02G585150PF00560LRR_1961162.2e-56176.3
TkA02G585150PF12799LRR_4961282.9e-32110.6
TkA02G585150PF24141LRR_ComC1051848.2e-1142.8
TkA02G585150PF29252LRR_NLRC41091286.76.5
TkA02G585150PF23598LRR_141121973.4e-29102.4
TkA02G585150PF00560LRR_11191382.2e-56176.3
TkA02G585150PF13516LRR_61191317.6e-1554.4
TkA02G585150PF13306LRR_51341771.49.5
TkA02G585150PF00560LRR_11441652.2e-56176.3
TkA02G585150PF13855LRR_81442011.2e-43147.4

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

ProteinOrganismDescriptionIdentityDatabaseConfidence
Q9LY03Arabidopsis thalianasp|Q9LY03|IRK_ARATH Probable LRR receptor-like serine/threonine-protein kinase IRK78.700%Swiss-ProtHigh
Q9LZV7Arabidopsis thalianasp|Q9LZV7|PXC2_ARATH Leucine-rich repeat receptor-like protein kinase PXC270.800%Swiss-ProtHigh
Q9LRT1Arabidopsis thalianasp|Q9LRT1|Y3804_ARATH Probably inactive leucine-rich repeat receptor-like protein kinase At3g2804044.400%Swiss-ProtLow
C0LGE4Arabidopsis thalianasp|C0LGE4|Y1124_ARATH Probable LRR receptor-like serine/threonine-protein kinase At1g1246043.900%Swiss-ProtLow
Q3EDL4Arabidopsis thalianasp|Q3EDL4|Y1154_ARATH Probable serine/threonine-protein kinase At1g0154038.700%Swiss-ProtLow

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