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Gene Card

Enter a TK1151 or OH-1004 gene ID to view sequences, annotations and analyses in the corresponding reference genome.
Flanking length, max 10000 bp

Gene overview

TkA02G494070
Reference: TK1151 Chr: Chr02 Coordinates: 126470268-126470933 Strand: - Type: protein_coding

cDNA / CDS / Protein Sequences

Available sequence downloads CDS FASTA Protein FASTA cDNA FASTA

504 bp · TkA02G494070|TK1151|cDNA

CAACGTATTCAAAAAGCTTCACTCCAGTCACCAAGTATCTCCTCTAATGGAACTTCATCTTCACGGGGGATTTCCCGAGGTTTAAGCTTTAAAAAGAAGGATCATATTCCTCCTAATGGTGAAAGCAGCTCTCTTCTTCCTTCCGACTCAAATGCACCACCGCCTGAAAGCCCTCTTGTCCCTAACACCGCCTGCCATTTATATTGGAAACGCTGCACATCTCTTCCAGTCAAACACGCATCAAATCCTTCTCCGTCAGC...

504 bp · TkA02G494070|TK1151|CDS

CAACGTATTCAAAAAGCTTCACTCCAGTCACCAAGTATCTCCTCTAATGGAACTTCATCTTCACGGGGGATTTCCCGAGGTTTAAGCTTTAAAAAGAAGGATCATATTCCTCCTAATGGTGAAAGCAGCTCTCTTCTTCCTTCCGACTCAAATGCACCACCGCCTGAAAGCCCTCTTGTCCCTAACACCGCCTGCCATTTATATTGGAAACGCTGCACATCTCTTCCAGTCAAACACGCATCAAATCCTTCTCCGTCAGC...

167 aa · TkA02G494070|TK1151|PROTEIN

QRIQKASLQSPSISSNGTSSSRGISRGLSFKKKDHIPPNGESSSLLPSDSNAPPPESPLVPNTACHLYWKRCTSLPVKHASNPSPSATTPISARTYNEQQKSQIGAAQTSVSRSLSVPGRNIVIVRSISFAARKDNDQIDSVDDEIGGVEVENDEEIDEEEAICRYS

Flanking Sequence Download

Sequence orientation and download details

Upstream/downstream are capped at 10000 bp per side. Negative-strand genes are reverse-complemented so the final FASTA follows transcriptional 5′→3′ orientation.

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ID Mapping

Input IDTkA02G494070
TK1151 IDTkA02G494070
OH-1004 IDLXL04_035866
Relationship / confidenceSequence Supported Annotation Or Model Conflict / Review
Protein identity (%)95.200
Protein coverage (%)TK1151 98.802 / OH-1004 24.849
Coverage and evidence

Coverage is the aligned span of the best-scoring HSP divided by representative protein length. A homolog match does not establish functional validation.

Source versionTK1151 / GWHBCHF00000000
SNP / Indel variants and carrier samplesCRA009020 · TK1151

Expand to load variant records for this gene.

Basic Information and Functional Annotation

Gene IDTkA02G494070
LocationChr02:126470268-126470933 (-)
DescriptionSimilar to ACA8: Calcium-transporting ATPase 8, plasma membrane-type
Arabidopsis / Rice Reference Genes and Papers

Download references for this gene

Arabidopsis

No hit for this species in the current source table.

Rice

No hit for this species in the current source table.

Functional annotation source
View annotation sources

Functional annotation source: OH1004 · LXL04_035866 · GCA_047496595.1_OSU_TarKok_2.0. These OH1004 annotations are retrieved through ID mapping; the Arabidopsis/rice table below uses protein alignments from the query reference.

GO annotations (OH1004 source)
GO:0009409 response to cold Biological Process
GO:0009414 response to water deprivation Biological Process
GO:0009555 pollen development Biological Process
GO:0009567 double fertilization forming a zygote and endosperm Biological Process
GO:0009624 response to nematode Biological Process
GO:0051480 regulation of cytosolic calcium ion concentration Biological Process
GO:0005634 nucleus Cellular Component
GO:0005886 plasma membrane Cellular Component
GO:0009506 plasmodesma Cellular Component
GO:0009536 plastid Cellular Component
GO:0016020 membrane Cellular Component
GO:0005388 P-type calcium transporter activity Molecular Function
KEGG gene cross-reference
ath:AT3G21180
ath:AT4G29900
ath:AT5G57110
dosa:Os04g0605500
These KEGG gene identifiers are linked through homologous proteins; they do not establish pathway function for this gene.

Gene expression

View expression in different studies, tissues and treatments. Results are presented separately by study and measurement unit.

Data sources and gene correspondence

Expression data come from public transcriptome studies. Reference genomes, sample metadata and measurement units are shown with the results. Ambiguous cross-reference correspondences do not select an expression record automatically; missing values do not mean zero expression.

Subcellular Localization Top 5

Computational predictions or homology annotations below do not replace localization experiments.

Cytoplasm0.493
Rank 1 · TkA02G494070 · TK1151
Nucleus0.352
Rank 2 · TkA02G494070 · TK1151
Cell membrane0.212
Rank 3 · TkA02G494070 · TK1151
Mitochondrion0.046
Rank 4 · TkA02G494070 · TK1151
Endoplasmic reticulum0.045
Rank 5 · TkA02G494070 · TK1151

LocPro · Direct prediction · Computational prediction, not experimental localization

Predicted Functional Domains

No result was found for this query.

Arabidopsis / Rice Protein Homology

Only Arabidopsis and rice are shown. Swiss-Prot entries are reviewed; TrEMBL entries are supplementary sequence candidates. Similarity is not experimental validation.

Download current result

No result was found for this query.

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